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L3_128_000G1_scaffold_5897

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_5897_1
unknown

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comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

L3_128_000G1_scaffold_5897_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(92..1141)
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBU3_9FIRM
L3_128_000G1_scaffold_5897_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1353..1994)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP9_9FIRM
L3_128_000G1_scaffold_5897_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2009..2734)
DNA (726bp) protein (242aa)
Universal bacterial protein YeaZ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP8_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EGJ47776.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M22 family protein
L3_128_000G1_scaffold_5897_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2799..3227)
DNA (429bp) protein (143aa)
Hydrolase, P-loop family n=2 Tax=Clostridiales RepID=G9YXA1_9FIRM
YjeE family ATPase {ECO:0000313|EMBL:EGJ47775.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L3_128_000G1_scaffold_5897_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3353..4540
DNA (1188bp) protein (396aa)
Rod shape determining protein RodA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP6_9FIRM
Rod shape determining protein RodA {ECO:0000313|EMBL:EGJ47774.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative cell division protein FtsW
L3_128_000G1_scaffold_5897_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4563..5927
DNA (1365bp) protein (455aa)
Aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC0_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_5897_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6034..7038
DNA (1005bp) protein (335aa)
dGTPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC1_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_128_000G1_scaffold_5897_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7091..8851
DNA (1761bp) protein (587aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC2_9FIRM
L3_128_000G1_scaffold_5897_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8848..9270
DNA (423bp) protein (141aa)
RNA polymerase sigma factor SigA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B0_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sigA; RNA polymerase sigma factor SigA
Displaying 10 items

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