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L3_128_000G1_scaffold_1381

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1381_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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135..422
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46184.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Dimethylmenaquinone methyltransferase
L3_128_000G1_scaffold_1381_2
unknown

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462..644
DNA (183bp) protein (61aa)

This feature has no annotations

L3_128_000G1_scaffold_1381_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

641..1945
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M416_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65426.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
glycosyltransferase
L3_128_000G1_scaffold_1381_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2554..3879
DNA (1326bp) protein (442aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGB7_9FIRM
L3_128_000G1_scaffold_1381_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4008..4418
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45720.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5521..5754
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45717.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_7
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

5780..6061
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZD62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12345.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_128_000G1_scaffold_1381_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6386..9241)
DNA (2856bp) protein (952aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46091.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
S-layer protein
L3_128_000G1_scaffold_1381_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9572..10246)
DNA (675bp) protein (225aa)
Two-component system, OmpR family, response regulator ResD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEZ9_9FIRM
Two-component system, OmpR family, response regulator ResD {ECO:0000313|EMBL:EGJ46019.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_128_000G1_scaffold_1381_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(10277..10846)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YED9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14703.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_128_000G1_scaffold_1381_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(10848..11129)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YED9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14703.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_128_000G1_scaffold_1381_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11155..11487)
DNA (333bp) protein (111aa)
Arsenate reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEZ8_9FIRM
Arsenate reductase {ECO:0000313|EMBL:EGJ46018.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Arsenate reductase and related proteins, glutaredoxin family
L3_128_000G1_scaffold_1381_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12154..13812
DNA (1659bp) protein (553aa)
Ribonuclease J n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEZ7_9FIRM
Ribonuclease J {ECO:0000313|EMBL:EGJ46017.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ribonuclease J
L3_128_000G1_scaffold_1381_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13894..15054)
DNA (1161bp) protein (387aa)
Chaperone protein DnaJ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG6_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaJ; chaperone protein DnaJ
L3_128_000G1_scaffold_1381_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15214..17070)
DNA (1857bp) protein (619aa)
Chaperone protein DnaK n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG5_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaK; chaperone protein DnaK
L3_128_000G1_scaffold_1381_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17158..17691)
DNA (534bp) protein (178aa)
Protein GrpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG4_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
grpE; GrpE protein
L3_128_000G1_scaffold_1381_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17740..18813)
DNA (1074bp) protein (358aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG3_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hrcA; heat-inducible transcription repressor HrcA
L3_128_000G1_scaffold_1381_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19228..20586)
DNA (1359bp) protein (453aa)
UPF0210 protein HMPREF0866_01547 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEM7_9FIRM
UPF0210 protein HMPREF0866_01547 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20904..21173)
DNA (270bp) protein (90aa)
UPF0237 protein HMPREF0866_01546 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEM6_9FIRM
UPF0237 protein HMPREF0866_01546 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_20
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(21233..21808)
DNA (576bp) protein (192aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14416.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_128_000G1_scaffold_1381_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22142..23095
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46420.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23100..24104
DNA (1005bp) protein (335aa)
DNA replication protein DnaC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEB9_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:EGJ46419.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24183..26867)
DNA (2685bp) protein (895aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC2_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EGJ45726.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
calcium-translocating P-type ATPase
L3_128_000G1_scaffold_1381_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27191..28312)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46122.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1381_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28325..29728)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46123.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
membrane bound O-acyl transferase MBOAT family protein
L3_128_000G1_scaffold_1381_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29889..30896)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46124.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Ig domain-containing protein
Displaying 26 items

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