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L3_128_000G1_scaffold_1411

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1411_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

234..872
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HTK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29237.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_128_000G1_scaffold_1411_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1027..1797)
DNA (771bp) protein (257aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEN8_9FIRM
L3_128_000G1_scaffold_1411_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2137..3045
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46229.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3164..3940
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46230.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
cof family hydrolase
L3_128_000G1_scaffold_1411_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4066..5664
DNA (1599bp) protein (533aa)
Metallo-beta-lactamase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFL1_9FIRM
Metallo-beta-lactamase {ECO:0000313|EMBL:EGJ46231.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ribonuclease
L3_128_000G1_scaffold_1411_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5707..6630
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46232.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted integral membrane protein
L3_128_000G1_scaffold_1411_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6684..7742)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45634.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_8
unknown

Not on your lists

7784..8005
DNA (222bp) protein (74aa)

This feature has no annotations

L3_128_000G1_scaffold_1411_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8076..9314)
DNA (1239bp) protein (413aa)
Malate/lactate dehydrogenases (EC:1.1.1.27)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45633.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_1411_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9372..14171)
DNA (4800bp) protein (1600aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45632.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
cytidyltransferase-related domain
L3_128_000G1_scaffold_1411_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14552..15547
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46143.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative LytR family regulatory protein
L3_128_000G1_scaffold_1411_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15664..16863
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46141.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
amidohydrolase
L3_128_000G1_scaffold_1411_13
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

17158..18102
DNA (945bp) protein (315aa)
phosphoglycerate dehydrogenase-related dehydrogenase (EC:1.1.1.26)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14774.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_128_000G1_scaffold_1411_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18389..19435
DNA (1047bp) protein (349aa)
A/G-specific adenine glycosylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFA0_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EGJ46120.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MutY; A/G-specific DNA glycosylase
L3_128_000G1_scaffold_1411_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19451..19996
DNA (546bp) protein (182aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4E7_CLOSW
deaminase/reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADL05017.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_128_000G1_scaffold_1411_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

19993..20868
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14769.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_128_000G1_scaffold_1411_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21149..23257
DNA (2109bp) protein (703aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF98_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGJ46118.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_1411_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23377..23766
DNA (390bp) protein (130aa)
C_GCAxxG_C_C family protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF99_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:EGJ46119.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
C_GCAxxG_C_C family protein
L3_128_000G1_scaffold_1411_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23813..24397)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46116.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24394..25449)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46115.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
baseplate J-like family protein
L3_128_000G1_scaffold_1411_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25462..25815)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46114.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25826..26263)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46113.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_1411_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26274..27068)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46112.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27221..27790)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46111.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_25
unknown

Not on your lists

comp(27801..28427)
DNA (627bp) protein (209aa)

This feature has no annotations

L3_128_000G1_scaffold_1411_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28424..28633)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46109.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_1411_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28714..29055)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46108.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_1411_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29059..29448)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46107.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29468..30529)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46106.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1411_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30526..30684)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XF85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46105.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying 30 items

View Taxonomy