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L3_128_000G1_scaffold_302

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_302_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(170..1252)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45692.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
gerKB; spore germination protein (amino acid permease)
L3_128_000G1_scaffold_302_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1296..2405)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45693.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Ger(x)C family germination protein
L3_128_000G1_scaffold_302_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2402..3919)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45694.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spore germination protein KA
L3_128_000G1_scaffold_302_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4070..4432
DNA (363bp) protein (121aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVA9_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EHM40679.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative BlaI family transcriptional regulator
L3_128_000G1_scaffold_302_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4563..6572
DNA (2010bp) protein (670aa)
Peptidase, M56 family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLW2_9CLOT
Peptidase, M56 family {ECO:0000313|EMBL:ERI73190.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
peptidase M56 family protein
L3_128_000G1_scaffold_302_6
unknown

Not on your lists

6569..7009
DNA (441bp) protein (147aa)

This feature has no annotations

L3_128_000G1_scaffold_302_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7144..8631)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45700.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_302_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8889..9662
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45701.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
permease
L3_128_000G1_scaffold_302_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9859..10326)
DNA (468bp) protein (156aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative deaminase (EC:3.5.4.-)
Cytosine deaminase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG15_9FIRM
L3_128_000G1_scaffold_302_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10404..13916)
DNA (3513bp) protein (1171aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGB9_9FIRM
L3_128_000G1_scaffold_302_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14264..15451)
DNA (1188bp) protein (396aa)
Stage II sporulation protein P n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG21_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:EGJ45702.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIP; stage II sporulation protein P
L3_128_000G1_scaffold_302_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15643..16902)
DNA (1260bp) protein (420aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5S060_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EQN60278.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_302_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17132..19282)
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFF0_9FIRM
L3_128_000G1_scaffold_302_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19645..19911)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFF1_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
30S ribosomal protein S15
L3_128_000G1_scaffold_302_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20367..22055)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46347.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_302_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22086..22433)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46346.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_302_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22644..23639)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45727.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC transporter membrane component
L3_128_000G1_scaffold_302_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23626..24741)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45728.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC transporter membrane component
L3_128_000G1_scaffold_302_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24744..26363)
DNA (1620bp) protein (540aa)
Simple sugar transport system ATP-binding protein (EC:3.6.3.-)
Simple sugar transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC5_9FIRM
Simple sugar transport system ATP-binding protein {ECO:0000313|EMBL:EGJ45729.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_302_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26548..27804)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45730.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
basic membrane lipoprotein
L3_128_000G1_scaffold_302_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27891..28469)
DNA (579bp) protein (193aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC7_9FIRM
xanthine phosphoribosyltransferase
L3_128_000G1_scaffold_302_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28797..30056)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45746.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Na+/H+-dicarboxylate symporters
L3_128_000G1_scaffold_302_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30435..31256
DNA (822bp) protein (274aa)
ParB family chromosome partitioning protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE3_9FIRM
ParB family chromosome partitioning protein {ECO:0000313|EMBL:EGJ45747.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ParB family chromosome partition protein
L3_128_000G1_scaffold_302_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31524..32282
DNA (759bp) protein (253aa)
Chromosome partitioning protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE4_9FIRM
Chromosome partitioning protein {ECO:0000313|EMBL:EGJ45748.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
parA; chromosome partitioning protein ParA
L3_128_000G1_scaffold_302_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32351..33244
DNA (894bp) protein (298aa)
ParB family chromosome partitioning protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE5_9FIRM
ParB family chromosome partitioning protein {ECO:0000313|EMBL:EGJ45749.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
parB; chromosome partitioning protein ParB
L3_128_000G1_scaffold_302_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33241..33822
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45750.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_302_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33944..35248
DNA (1305bp) protein (435aa)
Serine-tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE8_9FIRM
Serine-tRNA ligase {ECO:0000313|EMBL:EGJ45752.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
serS; seryl-tRNA synthetase
L3_128_000G1_scaffold_302_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35512..36570
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45753.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_302_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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36589..37038
DNA (450bp) protein (150aa)
Large-conductance mechanosensitive channel n=2 Tax=Oscillibacter RepID=U2QD27_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
large conductance mechanosensitive channel protein
L3_128_000G1_scaffold_302_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37019..37372
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45754.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying items 1-30 of 81 in total

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