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L3_128_000G1_scaffold_4429

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_4429_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(3..563)
DNA (561bp) protein (187aa)
Ribosome-binding ATPase YchF n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG23_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
engD; GTP-dependent nucleic acid-binding protein EngD
L3_128_000G1_scaffold_4429_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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952..1872
DNA (921bp) protein (307aa)
Exonuclease n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW92_9FIRM
Exonuclease {ECO:0000313|EMBL:CDB25521.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
exonuclease RNase T and DNA polymerase III
L3_128_000G1_scaffold_4429_3
unknown

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2093..2500
DNA (408bp) protein (136aa)

This feature has no annotations

L3_128_000G1_scaffold_4429_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2704..3516
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NKZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF38234.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_128_000G1_scaffold_4429_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3708..4349)
DNA (642bp) protein (214aa)
Undecaprenyl pyrophosphate synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z1Z9_9CLOT
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:CDD42353.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
dihydroorotate dehydrogenase
L3_128_000G1_scaffold_4429_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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4567..5433
DNA (867bp) protein (289aa)
23S rRNA (-C5)-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW7_9FIRM
23S rRNA (-C5)-methyltransferase {ECO:0000313|EMBL:EGJ46663.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_4429_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5519..6364
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW6_9FIRM
cobalt transporter ATP-binding subunit
L3_128_000G1_scaffold_4429_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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6563..7423
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW5_9FIRM
putative cobalt ABC transporter ATP-binding protein
L3_128_000G1_scaffold_4429_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7424..8233
DNA (810bp) protein (270aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW4_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative cobalt ABC transporter permease protein
L3_128_000G1_scaffold_4429_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8268..9440
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46685.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_4429_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9437..9757
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46686.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_4429_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9878..11194
DNA (1317bp) protein (439aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
tRNA nucleotidyltransferase (CCA-adding enzyme) n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD02_9FIRM
tRNA nucleotidyltransferase (CCA-adding enzyme) {ECO:0000313|EMBL:EGJ46698.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_4429_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11221..11568)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45446.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_4429_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11558..12019)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45447.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying 14 items

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