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L3_128_000G1_scaffold_4580

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_4580_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(2..352)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y9S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13128.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
conserved hypothetical protein TIGR00275
L3_128_000G1_scaffold_4580_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(400..1263)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47794.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RpiR family transcriptional regulator
L3_128_000G1_scaffold_4580_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1437..2171)
DNA (735bp) protein (245aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rsuB; pseudouridine synthase RsuB (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBR5_9FIRM
L3_128_000G1_scaffold_4580_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2193..3299)
DNA (1107bp) protein (369aa)
dacB; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBR4_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EGJ47792.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_4580_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3384..3803)
DNA (420bp) protein (140aa)
Sporulation protein YtfJ n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUQ1_9FIRM
Sporulation protein YtfJ {ECO:0000313|EMBL:EDN00102.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_128_000G1_scaffold_4580_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3899..4534)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47790.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_4580_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4531..5151)
DNA (621bp) protein (207aa)
Segregation and condensation protein B n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBR1_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
scpB; chromosome segregation and condensation protein ScpB
L3_128_000G1_scaffold_4580_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5174..5974)
DNA (801bp) protein (267aa)
Segregation and condensation protein A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBR0_9FIRM
Segregation and condensation protein A {ECO:0000313|EMBL:EGJ47788.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
scpA; chromosome segregation and condensation protein ScpA
L3_128_000G1_scaffold_4580_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6008..6694)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47787.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M50B family protein
L3_128_000G1_scaffold_4580_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

6892..7599
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZI56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14140.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_128_000G1_scaffold_4580_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7721..8320)
DNA (600bp) protein (200aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ8_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_4580_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8333..10750)
DNA (2418bp) protein (806aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ7_9FIRM
L3_128_000G1_scaffold_4580_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10920..11654)
DNA (735bp) protein (245aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ6_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
Displaying 13 items

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