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L3_128_000G1_scaffold_3295

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_3295_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1589)
DNA (1587bp) protein (529aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46139.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3295_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1756..2238)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFB8_9FIRM
hypothetical protein
L3_128_000G1_scaffold_3295_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(2232..3080)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14766.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
metallo beta lactamase family protein
L3_128_000G1_scaffold_3295_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3192..4484)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFB6_9FIRM
L3_128_000G1_scaffold_3295_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4757..5953)
DNA (1197bp) protein (399aa)
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFB5_9FIRM
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EGJ46135.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3295_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6082..6684)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY5_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
recR; recombination protein RecR
L3_128_000G1_scaffold_3295_7
unknown

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comp(6737..6907)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_128_000G1_scaffold_3295_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6913..7560)
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY4_9FIRM
L3_128_000G1_scaffold_3295_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7830..9050)
DNA (1221bp) protein (407aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY2_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:EGJ45843.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3295_10
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9347..9913
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LHW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS58359.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L3_128_000G1_scaffold_3295_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10045..10476
DNA (432bp) protein (144aa)
Flavodoxin n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P759_9FIRM
Flavodoxin {ECO:0000313|EMBL:EDS13034.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
flavodoxin, short chain
L3_128_000G1_scaffold_3295_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10633..11343
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45842.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_3295_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11434..12657
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45840.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_3295_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12727..13788
DNA (1062bp) protein (354aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45839.1}; Flags: Fragment;; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_3295_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13971..15287
DNA (1317bp) protein (439aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZP59_9CLOT
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:CDD45134.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Acetyl-CoA hydrolase
Displaying 15 items

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