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L3_128_000G1_scaffold_3492

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_3492_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
Chromate transport protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQX7_9FIRM
Chromate transport protein {ECO:0000313|EMBL:EDN01473.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
chromate transporter
L3_128_000G1_scaffold_3492_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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601..1515
DNA (915bp) protein (305aa)
LysR substrate binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQX6_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDN01472.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
LysR family transcriptional regulator
L3_128_000G1_scaffold_3492_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1759..3042
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47348.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M16B family protein
L3_128_000G1_scaffold_3492_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3047..4330
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47349.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
M16B family peptidase
L3_128_000G1_scaffold_3492_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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4327..5283
DNA (957bp) protein (319aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lgt; prolipoprotein diacylglycerol transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH2_9FIRM
L3_128_000G1_scaffold_3492_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5286..6131
DNA (846bp) protein (282aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH3_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3492_7
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6755..6949
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Clostridiales RepID=F7JMB0_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EGN38278.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
thiamine biosynthesis protein ThiS
L3_128_000G1_scaffold_3492_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6984..7592
DNA (609bp) protein (203aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Dorea sp. 5-2 RepID=R9MWS8_9FIRM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EOS75238.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
thiamine biosynthesis protein ThiF
L3_128_000G1_scaffold_3492_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7634..8401
DNA (768bp) protein (256aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Thiazole synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLG8_9FIRM
hypothetical protein
L3_128_000G1_scaffold_3492_10
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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8416..9669
DNA (1254bp) protein (418aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ANN9_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CCX40851.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L3_128_000G1_scaffold_3492_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9662..10285
DNA (624bp) protein (208aa)
Thiamine-phosphate pyrophosphorylase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLG6_9FIRM
Thiamine-phosphate pyrophosphorylase {ECO:0000313|EMBL:EHO23260.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_128_000G1_scaffold_3492_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10282..11070
DNA (789bp) protein (263aa)
thiDE1; thiamine biosynthesis bifunctional protein ThiED (EC:2.7.4.7 2.5.1.3 2.7.1.49)
Phosphomethylpyrimidine kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9Q8_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EGJ47086.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3492_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11104..12411
DNA (1308bp) protein (436aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Phosphomethylpyrimidine synthase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BCW9_9CLOT
hydroxymethylpyrimidine synthase
L3_128_000G1_scaffold_3492_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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12555..13151
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46715.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3492_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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13244..14188
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46714.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L3_128_000G1_scaffold_3492_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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14243..14761
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46713.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
Displaying 16 items

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