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L3_128_000G1_scaffold_3509

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_3509_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..284)
DNA (282bp) protein (94aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8X9_9FIRM
L3_128_000G1_scaffold_3509_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

396..1025
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJ57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15607.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
CRP (cyclic AMP receptor protein) regulatory protein
L3_128_000G1_scaffold_3509_3
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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1340..2767
DNA (1428bp) protein (476aa)
Magnesium transporter n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BKL6_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
magnesium transporter
L3_128_000G1_scaffold_3509_4
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2843..3583
DNA (741bp) protein (247aa)
Putative acetyltransferase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KUP8_OSCVS
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:BAL00491.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_128_000G1_scaffold_3509_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3642..5078)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47852.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
regulatory protein
L3_128_000G1_scaffold_3509_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5071..5460)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47851.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
CopY family transcriptional repressor
L3_128_000G1_scaffold_3509_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5680..6420
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47849.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
N-acetylmuramoyl-L-alanine amidase
L3_128_000G1_scaffold_3509_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6443..7723
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47848.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative glycosyl hydrolase
L3_128_000G1_scaffold_3509_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

7799..8191
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13526.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Thioesterase superfamily
L3_128_000G1_scaffold_3509_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

8195..8683
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZGH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13525.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
prolyl-tRNA synthetase
L3_128_000G1_scaffold_3509_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(8776..10266)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14521.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
glycosyl transferase family 1
L3_128_000G1_scaffold_3509_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10595..11476)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X997_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
xerD; tyrosine recombinase XerD
L3_128_000G1_scaffold_3509_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11505..12125)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X998_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48067.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3509_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12445..13869)
DNA (1425bp) protein (475aa)
SCIFF radical SAM maturase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X999_9FIRM
SCIFF radical SAM maturase {ECO:0000313|EMBL:EGJ48068.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L3_128_000G1_scaffold_3509_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13968..14108)
DNA (141bp) protein (47aa)
Six-cysteine peptide SCIFF n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A0_9FIRM
Six-cysteine peptide SCIFF {ECO:0000313|EMBL:EGJ48069.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_3509_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14201..14647)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48070.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying 16 items

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