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L3_128_000G1_scaffold_3648

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_3648_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..158
DNA (156bp) protein (52aa)
RNA-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHA4_9FIRM
RNA-binding protein {ECO:0000313|EMBL:EGJ45397.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_3648_2
unknown

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403..819
DNA (417bp) protein (139aa)

This feature has no annotations

L3_128_000G1_scaffold_3648_3
unknown

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881..1288
DNA (408bp) protein (136aa)

This feature has no annotations

L3_128_000G1_scaffold_3648_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1352..2563
DNA (1212bp) protein (404aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Nicotinate (Nicotinamide) nucleotide adenylyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHA3_9FIRM
L3_128_000G1_scaffold_3648_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2570..4198
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45395.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative LytR family regulatory protein
L3_128_000G1_scaffold_3648_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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4290..4649
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHA1_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
iojap-related protein
L3_128_000G1_scaffold_3648_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5461..8103
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9I9_9FIRM
L3_128_000G1_scaffold_3648_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8651..8857
DNA (207bp) protein (69aa)
50S ribosomal protein L31 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B9_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpmE; 50S ribosomal protein L31
L3_128_000G1_scaffold_3648_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8978..9478
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48165.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_128_000G1_scaffold_3648_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9538..10827
DNA (1290bp) protein (430aa)
GTPase HflX n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B7_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hlfX; putative GTP-binding protein HflX
L3_128_000G1_scaffold_3648_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10912..11448
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48163.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
N-acetyltransferase GCN5
L3_128_000G1_scaffold_3648_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11504..12067)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46982.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_3648_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12289..12909)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47495.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3648_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13178..13360)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47408.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_3648_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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13594..14208
DNA (615bp) protein (205aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Dihydroorotase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM9_9FIRM
pyrC; dihydroorotase
Displaying 15 items

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