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L3_128_000G1_scaffold_1676

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1676_1
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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72..581
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Selenomonas bovis RepID=UPI0003606E7C
baseplate J family protein
Baseplate J family protein {ECO:0000313|EMBL:ABR48584.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L3_128_000G1_scaffold_1676_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(922..1842)
DNA (921bp) protein (307aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8Z2_9CLOT
L3_128_000G1_scaffold_1676_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1952..3106)
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0Y7_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
chaperone protein DnaJ
L3_128_000G1_scaffold_1676_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3275..5125)
DNA (1851bp) protein (617aa)
Chaperone protein DnaK n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0J6_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
dnaK; chaperone protein DnaK
L3_128_000G1_scaffold_1676_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5228..5770)
DNA (543bp) protein (181aa)
Protein GrpE n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5E1_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
grpE; protein GrpE
L3_128_000G1_scaffold_1676_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5786..6817)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1E6_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hrcA; heat-inducible transcription repressor HrcA
L3_128_000G1_scaffold_1676_7
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7048..7626)
DNA (579bp) protein (193aa)
galactoside O-acetyltransferase (EC:2.3.1.18)
Galactoside O-acetyltransferase n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KHC9_9FIRM
Galactoside O-acetyltransferase {ECO:0000313|EMBL:EOS45703.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L3_128_000G1_scaffold_1676_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7623..8117)
DNA (495bp) protein (165aa)
mutX; mutator MutT protein (EC:3.6.1.-)
Mutator MutT protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TUI2_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:CDC73484.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_128_000G1_scaffold_1676_9
unknown

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8241..8789
DNA (549bp) protein (183aa)

This feature has no annotations

L3_128_000G1_scaffold_1676_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9060..9854
DNA (795bp) protein (265aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W639_9CLOT
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EOQ38617.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_000G1_scaffold_1676_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9858..10367
DNA (510bp) protein (170aa)
ThiW protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W189_9CLOT
ThiW protein {ECO:0000313|EMBL:EOQ38618.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
thiW protein
L3_128_000G1_scaffold_1676_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10364..11188
DNA (825bp) protein (275aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAB2_9FIRM
L3_128_000G1_scaffold_1676_13
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11195..11917
DNA (723bp) protein (241aa)
Putative transcription activator (EC:3.5.99.2)
Putative transcription activator n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9R4_9CLOT
Putative transcription activator {ECO:0000313|EMBL:CCY09236.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_128_000G1_scaffold_1676_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11899..12675
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W260_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38621.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_128_000G1_scaffold_1676_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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12672..13421
DNA (750bp) protein (250aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GVH1_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:CBL41813.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_128_000G1_scaffold_1676_16
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13453..14472
DNA (1020bp) protein (340aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9R0_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components {ECO:0000313|EMBL:CCY09231.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_128_000G1_scaffold_1676_17
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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14620..15648
DNA (1029bp) protein (343aa)
LacI family bacterial regulatory protein n=2 Tax=Anaerostipes RepID=E5VQD0_9FIRM
LacI family bacterial regulatory protein {ECO:0000313|EMBL:CDC38545.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
transcriptional regulator, LacI family
L3_128_000G1_scaffold_1676_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15708..16070)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37256.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted permeases
L3_128_000G1_scaffold_1676_19
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16083..16448)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9D4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38479.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_128_000G1_scaffold_1676_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16550..17995)
DNA (1446bp) protein (482aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUA5_9CLOT
putative nicotinate phosphoribosyltransferase
L3_128_000G1_scaffold_1676_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18260..19513
DNA (1254bp) protein (418aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
argG; Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY53_9CLOT
L3_128_000G1_scaffold_1676_22
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19634..21019
DNA (1386bp) protein (462aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
argH; Argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGM4_9CLOT
L3_128_000G1_scaffold_1676_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21055..22011
DNA (957bp) protein (319aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTR1_9CLOT
L3_128_000G1_scaffold_1676_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22044..23252
DNA (1209bp) protein (403aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSW7_9CLOT
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_000G1_scaffold_1676_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23269..24141
DNA (873bp) protein (291aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUB4_9CLOT
L3_128_000G1_scaffold_1676_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24185..25366
DNA (1182bp) protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
acetylornithine aminotransferase apoenzyme (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY59_9CLOT
L3_128_000G1_scaffold_1676_27
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25505..26410
DNA (906bp) protein (302aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B635_9CLOT
Displaying 27 items

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