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L3_128_000G1_scaffold_1864

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1864_1
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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151..330
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MRW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73809.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
myo-inositol degradation/rhizopine catabolism protein
L3_128_000G1_scaffold_1864_2
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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354..1517
DNA (1164bp) protein (388aa)
Oxidoreductase n=1 Tax=Anaerostipes sp. CAG:276 RepID=R6QZ53_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CDC38259.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
oxidoreductase
L3_128_000G1_scaffold_1864_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1563..3191
DNA (1629bp) protein (543aa)
Solute:sodium symporter (SSS) family transporter n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5Z7_9CLOT
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:EOQ38572.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
sodium:solute symporter family protein
L3_128_000G1_scaffold_1864_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3466..5121
DNA (1656bp) protein (552aa)
Glutamate-tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W932_9CLOT
Glutamate-tRNA ligase {ECO:0000313|EMBL:EOQ41353.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glutamyl-tRNA synthetase
L3_128_000G1_scaffold_1864_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5170..6828
DNA (1659bp) protein (553aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine-tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8X0_9CLOT
L3_128_000G1_scaffold_1864_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6927..7562)
DNA (636bp) protein (212aa)
methionine synthase (EC:2.1.1.13)
Methanosarcina family methyltransferase cognate corrinoid protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8X9_9CLOT
Methanosarcina family methyltransferase cognate corrinoid protein {ECO:0000313|EMBL:EOQ41308.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_000G1_scaffold_1864_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8317..9726)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0I1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38348.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator
L3_128_000G1_scaffold_1864_8
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9810..10754)
DNA (945bp) protein (315aa)
Putative membrane protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QW46_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC40045.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Predicted permeases
L3_128_000G1_scaffold_1864_9
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10755..11615)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT62_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ63780.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L3_128_000G1_scaffold_1864_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11667..12104)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38347.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator, MarR family
L3_128_000G1_scaffold_1864_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12258..13391)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38120.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative NagC family transcriptional regulator
L3_128_000G1_scaffold_1864_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13513..13737)
DNA (225bp) protein (75aa)
Acyl carrier protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5A1_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
acyl carrier protein
L3_128_000G1_scaffold_1864_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13762..14553)
DNA (792bp) protein (264aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00176990}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W983_9CLOT
L3_128_000G1_scaffold_1864_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14546..15424)
DNA (879bp) protein (293aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4D4_9CLOT
L3_128_000G1_scaffold_1864_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15437..16786)
DNA (1350bp) protein (450aa)
accC1; biotin carboxylase 1 (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4U1_9CLOT
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EOQ39734.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_000G1_scaffold_1864_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16805..17227)
DNA (423bp) protein (141aa)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W463_9CLOT
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ {ECO:0000313|EMBL:EOQ39735.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
fabZ2; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
L3_128_000G1_scaffold_1864_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17241..17705)
DNA (465bp) protein (155aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5A5_9CLOT
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EOQ39736.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_128_000G1_scaffold_1864_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17709..18938)
DNA (1230bp) protein (410aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W988_9CLOT
L3_128_000G1_scaffold_1864_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18950..19678)
DNA (729bp) protein (243aa)
fabG3; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4D8_9CLOT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EOQ39738.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_000G1_scaffold_1864_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19696..20643)
DNA (948bp) protein (316aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4U6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39739.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_128_000G1_scaffold_1864_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20662..21669)
DNA (1008bp) protein (336aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W468_9CLOT
L3_128_000G1_scaffold_1864_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21891..22808
DNA (918bp) protein (306aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
(acyl-carrier-protein) S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5B0_9CLOT
L3_128_000G1_scaffold_1864_23
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22932..24662
DNA (1731bp) protein (577aa)
Superfamily II DNA and RNA helicases n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L216_9FIRM
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:CDE82704.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Superfamily II DNA and RNA helicases
Displaying 23 items

View Taxonomy