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L3_128_000G1_scaffold_4683

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_4683_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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77..1957
DNA (1881bp) protein (627aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74694.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_128_000G1_scaffold_4683_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1984..2337
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74695.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_128_000G1_scaffold_4683_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2447..2704
DNA (258bp) protein (86aa)
transposase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DAC261
Uncharacterized protein {ECO:0000313|EMBL:ENZ07165.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_128_000G1_scaffold_4683_4
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2701..3363
DNA (663bp) protein (221aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MR39_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL36225.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_4683_5
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3351..4598
DNA (1248bp) protein (416aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZR6_9FIRM
two-component sensor histidine kinase
L3_128_000G1_scaffold_4683_6
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4659..5654
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FVF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW38377.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
L3_128_000G1_scaffold_4683_7
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5660..6799
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MR40_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36226.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_4683_8
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6807..7682
DNA (876bp) protein (292aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MR41_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL36227.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_4683_9
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7679..8869
DNA (1191bp) protein (397aa)
Uncharacterized protein n=7 Tax=Clostridium thermocellum RepID=E6UM59_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN52645.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_128_000G1_scaffold_4683_10
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8857..10467
DNA (1611bp) protein (537aa)
Uncharacterized protein n=6 Tax=Clostridium thermocellum RepID=E6UM60_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN52644.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_128_000G1_scaffold_4683_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10914..11327
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA PF5_9FIRM">RepID=G9RPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74702.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
Displaying 11 items

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