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L3_128_000G1_scaffold_1822

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1822_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3..95
DNA (93bp) protein (31aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K2_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS74236.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_1822_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

170..1309
DNA (1140bp) protein (380aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDS74237.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDS74237.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K3_9FIRM
TrmA family RNA methyltransferase
L3_128_000G1_scaffold_1822_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1400..2086)
DNA (687bp) protein (229aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K4_9FIRM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:EDS74238.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
gamma-carboxymuconolactone decarboxylase subunit like protein
L3_128_000G1_scaffold_1822_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2112..2453)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74239.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Predicted transcriptional regulators
L3_128_000G1_scaffold_1822_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2557..3444)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K6_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS74240.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transcriptional regulator
L3_128_000G1_scaffold_1822_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3553..4563)
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K7_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDS74241.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
aldo/keto reductase
L3_128_000G1_scaffold_1822_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4762..7443
DNA (2682bp) protein (894aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74242.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
macB; macrolide export ATP-binding/permease
L3_128_000G1_scaffold_1822_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7466..8017
DNA (552bp) protein (184aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K9_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDS74243.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acetyltransferase
L3_128_000G1_scaffold_1822_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8396..8527
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74244.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_1822_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8524..8802
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74245.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cotJB; Protein CotJB
L3_128_000G1_scaffold_1822_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8766..9377
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74246.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
manganese containing catalase
L3_128_000G1_scaffold_1822_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9497..9814
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L5_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDS74249.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transcriptional regulator, PadR family
L3_128_000G1_scaffold_1822_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9814..10512
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74250.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Protein of unknown function (DUF1700).
L3_128_000G1_scaffold_1822_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10538..11248
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74251.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_1822_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11248..11427
DNA (180bp) protein (60aa)
PspC domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L8_9FIRM
PspC domain protein {ECO:0000313|EMBL:EDS74252.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
phage shock protein C, PspC
L3_128_000G1_scaffold_1822_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11564..13159
DNA (1596bp) protein (532aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3L9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74253.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC transporter ATPase
L3_128_000G1_scaffold_1822_17
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13371..14720
DNA (1350bp) protein (450aa)
CRISPR type III-a/mtube-associated protein csm6 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZIM5_9CLOT
CRISPR type III-a/mtube-associated protein csm6 {ECO:0000313|EMBL:EMZ15701.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_1822_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14729..17077
DNA (2349bp) protein (783aa)
CRISPR-associated protein, Csm1 family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8S9_9FIRM
CRISPR-associated protein, Csm1 family {ECO:0000313|EMBL:EEC90827.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_128_000G1_scaffold_1822_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17078..17491
DNA (414bp) protein (138aa)
CRISPR-associated protein, Csm2 family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8S8_9FIRM
CRISPR-associated protein, Csm2 family {ECO:0000313|EMBL:EEC90826.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_128_000G1_scaffold_1822_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17509..18138
DNA (630bp) protein (210aa)
CRISPR-associated RAMP protein, Csm3 family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8S7_9FIRM
CRISPR-associated RAMP protein, Csm3 family {ECO:0000313|EMBL:EEC90825.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Csm3 family CRISPR-associated RAMP protein
L3_128_000G1_scaffold_1822_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18140..19078
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q607_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24195.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_128_000G1_scaffold_1822_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19090..20262
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24196.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_128_000G1_scaffold_1822_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20240..20974
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24197.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_128_000G1_scaffold_1822_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20946..21683
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6M6_9FIRM
CRISPR-associated endoribonuclease {ECO:0000256|PIRNR:PIRNR005054}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
CRISPR-associated Cas family protein
L3_128_000G1_scaffold_1822_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21658..22041
DNA (384bp) protein (128aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCY8_9FIRM
CRISPR-associated protein Cas1
L3_128_000G1_scaffold_1822_26
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22047..22646
DNA (600bp) protein (200aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C952_9FIRM
CRISPR-associated protein Cas1
L3_128_000G1_scaffold_1822_27
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22648..22908
DNA (261bp) protein (87aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C951_9FIRM
CRISPR-associated protein Cas2
L3_128_000G1_scaffold_1822_28
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23832..24125
DNA (294bp) protein (98aa)
Transposase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZ70_9FIRM
Transposase {ECO:0000313|EMBL:EDS75717.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transposase IS3/IS911 family protein
L3_128_000G1_scaffold_1822_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24201..24764
DNA (564bp) protein (188aa)
Integrase core domain protein n=2 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZ69_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EDS75716.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
integrase catalytic subunit
L3_128_000G1_scaffold_1822_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24724..25017
DNA (294bp) protein (98aa)
Integrase core domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C482_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EDS75049.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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