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L3_128_000G1_scaffold_1925

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1925_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(121..3954)
DNA (3834bp) protein (1278aa)
O-GlcNAcase BT_4395 {ECO:0000313|EMBL:EDS74621.1}; EC=3.2.1.52 {ECO:0000313|EMBL:EDS74621.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
O-GlcNAcase BT_4395 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C363_9FIRM
nagL; hyaluronidase
L3_128_000G1_scaffold_1925_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4281..4838)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C362_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
nusG; transcription antitermination protein NusG
L3_128_000G1_scaffold_1925_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4840..5076)
DNA (237bp) protein (79aa)
Preprotein translocase, SecE subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C361_9FIRM
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:EDS74619.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_1925_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(5040..5189)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C360_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpmG; 50S ribosomal protein L33
L3_128_000G1_scaffold_1925_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5238..5855)
DNA (618bp) protein (206aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C359_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDS74617.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_1925_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5874..6599)
DNA (726bp) protein (242aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C358_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDS74616.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
TrmH family RNA methyltransferase
L3_128_000G1_scaffold_1925_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6637..7014)
DNA (378bp) protein (126aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C357_9FIRM
ribonuclease III
L3_128_000G1_scaffold_1925_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7014..8351)
DNA (1338bp) protein (446aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Cysteine--tRNA ligase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C356_9FIRM
cysteinyl-tRNA synthetase
L3_128_000G1_scaffold_1925_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8629..9144)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C354_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74612.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_1925_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9221..10000)
DNA (780bp) protein (260aa)
Cof-like hydrolase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C353_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS74611.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
HAD-superfamily hydrolase, subfamily IIB
L3_128_000G1_scaffold_1925_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10049..11479)
DNA (1431bp) protein (477aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
glgA; glycogen synthase GlgA (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C352_9FIRM
L3_128_000G1_scaffold_1925_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11479..12588)
DNA (1110bp) protein (370aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EDS74609.1}; EC=2.7.7.27 {ECO:0000313|EMBL:EDS74609.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C351_9FIRM
L3_128_000G1_scaffold_1925_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12603..13781)
DNA (1179bp) protein (393aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C350_9FIRM
L3_128_000G1_scaffold_1925_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13918..14355
DNA (438bp) protein (146aa)
Cell wall hydrolase CwlJ n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C349_9FIRM
Cell wall hydrolase CwlJ {ECO:0000313|EMBL:EDS74607.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cell wall hydrolase
L3_128_000G1_scaffold_1925_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14403..14738
DNA (336bp) protein (112aa)
Putative spore coat protein GerQ n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C348_9FIRM
Putative spore coat protein GerQ {ECO:0000313|EMBL:EDS74606.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_1925_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14837..15112)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C347_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74605.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_1925_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15138..15593)
DNA (456bp) protein (152aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C346_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS74604.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acetyltransferase
L3_128_000G1_scaffold_1925_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15604..16764)
DNA (1161bp) protein (387aa)
Bifunctional protein FolC n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C345_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:EDS74603.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
folC; folylpolyglutamate synthase
L3_128_000G1_scaffold_1925_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16757..17416)
DNA (660bp) protein (220aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
uracil-DNA glycosylase (EC:3.2.2.27)
Uracil-DNA glycosylase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C344_9FIRM
L3_128_000G1_scaffold_1925_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17406..18236)
DNA (831bp) protein (277aa)
Cof-like hydrolase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C343_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS74601.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Cof-like hydrolase
L3_128_000G1_scaffold_1925_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18236..19057)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C342_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS74600.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
HAD superfamily hydrolase
L3_128_000G1_scaffold_1925_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19070..19846)
DNA (777bp) protein (259aa)
Putative esterase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C341_9FIRM
Putative esterase {ECO:0000313|EMBL:EDS74599.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
esterase
L3_128_000G1_scaffold_1925_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19954..20238)
DNA (285bp) protein (95aa)
Septum formation initiator n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C340_9FIRM
Septum formation initiator {ECO:0000313|EMBL:EDS74598.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_1925_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20235..20618)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C339_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74597.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Spore cortex biosynthesis protein
L3_128_000G1_scaffold_1925_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20618..20917)
DNA (300bp) protein (100aa)
Sporulation protein YabP n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C338_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EDS74596.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_1925_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21053..23500)
DNA (2448bp) protein (816aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Beta-hexosamidase A (EC:3.2.1.52)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C337_9FIRM
L3_128_000G1_scaffold_1925_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23629..24186)
DNA (558bp) protein (186aa)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C336_9FIRM
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EDS74594.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LPXTG cell wall anchor domain protein
Displaying 27 items

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