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L3_128_000G1_scaffold_2488

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2488_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(119..1285)
DNA (1167bp) protein (389aa)
Purine catabolism regulatory protein-like family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X1_9FIRM
Purine catabolism regulatory protein-like family {ECO:0000313|EMBL:EDS73715.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transcriptional regulator
L3_128_000G1_scaffold_2488_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1383..1562
DNA (180bp) protein (60aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N8B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33532.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_128_000G1_scaffold_2488_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1648..2073)
DNA (426bp) protein (142aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X2_9FIRM
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
L3_128_000G1_scaffold_2488_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2077..3318)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X3_9FIRM
L3_128_000G1_scaffold_2488_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3330..4082)
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDS73718.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDS73718.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X4_9FIRM
L3_128_000G1_scaffold_2488_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4084..5016)
DNA (933bp) protein (311aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X5_9FIRM
malonyl CoA-ACP transacylase
L3_128_000G1_scaffold_2488_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5016..6080)
DNA (1065bp) protein (355aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X6_9FIRM
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EDS73720.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
2-nitropropane dioxygenase family oxidoreductase
L3_128_000G1_scaffold_2488_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6083..7015)
DNA (933bp) protein (311aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X7_9FIRM
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EDS73721.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_2488_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7019..7960)
DNA (942bp) protein (314aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X8_9FIRM
L3_128_000G1_scaffold_2488_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7969..8430)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4X9_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDS73723.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
MarR family transcriptional regulator
L3_128_000G1_scaffold_2488_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8423..9373)
DNA (951bp) protein (317aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acetyl-CoA carboxylase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y0_9FIRM
L3_128_000G1_scaffold_2488_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9373..10245)
DNA (873bp) protein (291aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y1_9FIRM
accD; Acetyl-CoA carboxylase beta subunit
L3_128_000G1_scaffold_2488_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10249..11601)
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EDS73726.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EDS73726.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
cfiB; 2-oxoglutarate carboxylase small subunit (EC:6.4.1.7)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y2_9FIRM
L3_128_000G1_scaffold_2488_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11607..12068)
DNA (462bp) protein (154aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y3_9FIRM
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EDS73727.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_128_000G1_scaffold_2488_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12186..12419)
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y4_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acyl carrier protein
L3_128_000G1_scaffold_2488_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12676..13455)
DNA (780bp) protein (260aa)
HD domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y5_9FIRM
HD domain protein {ECO:0000313|EMBL:EDS73729.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
HD domain.
L3_128_000G1_scaffold_2488_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13590..14084
DNA (495bp) protein (165aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y6_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS73730.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
N-acetyltransferase GCN5
L3_128_000G1_scaffold_2488_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14161..14610
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73731.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_2488_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14612..15637)
DNA (1026bp) protein (342aa)
Glycosyl hydrolase family 25 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y8_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EDS73732.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_2488_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15797..16999
DNA (1203bp) protein (401aa)
NlpC/P60 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Y9_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EDS73733.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
NLP/P60 protein
L3_128_000G1_scaffold_2488_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17103..18392
DNA (1290bp) protein (430aa)
NlpC/P60 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Z0_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EDS73734.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
secreted cell wall DL-endopeptidase
L3_128_000G1_scaffold_2488_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18469..18843
DNA (375bp) protein (125aa)
LrgA family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Z1_9FIRM
LrgA family protein {ECO:0000313|EMBL:EDS73735.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Putative effector of murein hydrolase LrgA
L3_128_000G1_scaffold_2488_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18836..19528
DNA (693bp) protein (231aa)
Putative TIGR00659 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4Z2_9FIRM
Putative TIGR00659 family protein {ECO:0000313|EMBL:EDS73736.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
LrgB family protein
L3_128_000G1_scaffold_2488_24
unknown

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comp(19587..19670)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 24 items

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