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L3_128_000G1_scaffold_847

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_847_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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715..1674
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2E875_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90557.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_128_000G1_scaffold_847_2
unknown

Not on your lists

1880..2050
DNA (171bp) protein (57aa)

This feature has no annotations

L3_128_000G1_scaffold_847_3
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2204..2809
DNA (606bp) protein (202aa)
Fic family protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LMQ1_9FIRM
Fic family protein {ECO:0000313|EMBL:EFU76860.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
Protein involved in cell division
L3_128_000G1_scaffold_847_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3128..3610
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74748.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
membrane protein
L3_128_000G1_scaffold_847_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3613..4302
DNA (690bp) protein (230aa)
Radical SAM domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2R2_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDS74747.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
radical SAM protein
L3_128_000G1_scaffold_847_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4590..5147
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2R1_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
translation elongation factor P (EF-P)
L3_128_000G1_scaffold_847_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5168..5914
DNA (747bp) protein (249aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2R0_9FIRM
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDS74745.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_847_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6039..7370)
DNA (1332bp) protein (444aa)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2Q9_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EDS74744.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
putative pyridoxal phosphate-dependent transferase
L3_128_000G1_scaffold_847_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7370..8755)
DNA (1386bp) protein (462aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2Q8_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EDS74743.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_847_10
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8822..8980)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EKQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03494.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_128_000G1_scaffold_847_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9122..10381)
DNA (1260bp) protein (420aa)
Aluminum resistance protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2Q6_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:EDS74741.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_128_000G1_scaffold_847_12
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10776..11507
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9X4_RUMC1
Uncharacterized protein {ECO:0000313|EMBL:CBL16419.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
hypothetical protein
L3_128_000G1_scaffold_847_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11615..14356
DNA (2742bp) protein (914aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KT65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL10067.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Uncharacterized conserved protein (DUF2075)./Protein of unknown function (DUF2726)./Viral (Superfamily 1) RNA helicase.
L3_128_000G1_scaffold_847_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14622..15365)
DNA (744bp) protein (248aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
S-adenosyl-methyltransferase MraW n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJG0_9FIRM
hypothetical protein
L3_128_000G1_scaffold_847_15
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15559..18936
DNA (3378bp) protein (1126aa)
hypothetical protein n=1 Tax=Treponema bryantii RepID=UPI0003B66D73
Uncharacterized protein {ECO:0000313|EMBL:EDP95076.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
L3_128_000G1_scaffold_847_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(19416..20402)
DNA (987bp) protein (329aa)
Bacterial group 2 Ig-like protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RPU5_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCZ36846.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_128_000G1_scaffold_847_17
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20633..20815
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0ITX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT23377.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L3_128_000G1_scaffold_847_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20928..21674
DNA (747bp) protein (249aa)
Carbohydrate esterase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GE22_9FIRM
Carbohydrate esterase {ECO:0000313|EMBL:EFW03825.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Predicted hydrolase of the alpha/beta superfamily
L3_128_000G1_scaffold_847_19
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21797..22492
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RDZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22822.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_128_000G1_scaffold_847_20
unknown

Not on your lists

23110..23352
DNA (243bp) protein (81aa)

This feature has no annotations

L3_128_000G1_scaffold_847_21
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23616..24647
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N800_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79424.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
esterase/lipase-like protein
L3_128_000G1_scaffold_847_22
unknown

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24797..25030
DNA (234bp) protein (78aa)

This feature has no annotations

L3_128_000G1_scaffold_847_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25266..25988
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82443.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
two component transcriptional regulator, winged helix family
L3_128_000G1_scaffold_847_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25948..27282
DNA (1335bp) protein (445aa)
Histidine kinase A domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2P5_9FIRM
Histidine kinase A domain protein {ECO:0000313|EMBL:EDS74730.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
HAMP domain protein
L3_128_000G1_scaffold_847_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27324..27533
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74729.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_847_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27674..27973)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74728.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_847_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28179..28469)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74727.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_847_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29044..29925)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74049.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_128_000G1_scaffold_847_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29937..30686)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2P0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74725.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
acetyltransferase
L3_128_000G1_scaffold_847_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30750..31643)
DNA (894bp) protein (298aa)
HTH domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2N9_9FIRM
HTH domain protein {ECO:0000313|EMBL:EDS74724.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
putative transcriptional regulator
Displaying items 1-30 of 39 in total

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