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L3_128_000G1_scaffold_976

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_976_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(190..993)
DNA (804bp) protein (268aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FK23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23535.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glycine/betaine ABC transporter ATP-binding protein
L3_128_000G1_scaffold_976_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1004..2542)
DNA (1539bp) protein (513aa)
ABC transporter, substrate-binding protein, QAT family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EF19_9CLOT
ABC transporter, substrate-binding protein, QAT family {ECO:0000313|EMBL:EEG29921.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
osmoprotectant ABC transporter substrate-binding/permease
L3_128_000G1_scaffold_976_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2545..3147)
DNA (603bp) protein (201aa)
4Fe-4S binding domain-containing protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9S9_9FIRM
4Fe-4S binding domain-containing protein {ECO:0000313|EMBL:CCZ23094.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
(4Fe-4S)-binding protein
L3_128_000G1_scaffold_976_4
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3260..4264)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JNM0_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF26036.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
L3_128_000G1_scaffold_976_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4429..5796)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XSC9_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY98868.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative efflux protein, MATE family
L3_128_000G1_scaffold_976_6
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5979..6827)
DNA (849bp) protein (283aa)
murQ; N-acetylmuramic acid 6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=592022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain DSM 319).;"
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Bacillus megaterium RepID=UPI00034D0AD8
L3_128_000G1_scaffold_976_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6945..7385)
DNA (441bp) protein (147aa)
Hsp20/alpha crystallin family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2K1_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EDS74686.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Molecular chaperone (small heat shock protein)
L3_128_000G1_scaffold_976_8
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7730..8602)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KUE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68719.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Predicted membrane protein
L3_128_000G1_scaffold_976_9
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9055..9273)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BGD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ35894.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_128_000G1_scaffold_976_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9710..10126)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74697.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Protein of unknown function (DUF2992).
L3_128_000G1_scaffold_976_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10341..10691)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74698.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
lactoylglutathione lyase (LGUL) family protein
L3_128_000G1_scaffold_976_12
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10752..11438)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GK09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHI54887.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
SAM-dependent methyltransferase
L3_128_000G1_scaffold_976_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11582..14065)
DNA (2484bp) protein (828aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BNL0_9CLOT
L3_128_000G1_scaffold_976_14
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14068..14787)
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAL8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDP11670.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
KDP operon transcriptional regulatory protein KdpE
L3_128_000G1_scaffold_976_15
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14953..15576)
DNA (624bp) protein (208aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=2 Tax=Firmicutes RepID=A8RAL7_9FIRM
L3_128_000G1_scaffold_976_16
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15586..17643)
DNA (2058bp) protein (686aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAL6_9FIRM
L3_128_000G1_scaffold_976_17
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17667..19406)
DNA (1740bp) protein (580aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Potassium-transporting ATPase A chain n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAL5_9FIRM
potassium-transporting ATPase subunit A
L3_128_000G1_scaffold_976_18
unknown

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comp(19517..19609)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_128_000G1_scaffold_976_19
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19808..21697
DNA (1890bp) protein (630aa)
Universal stress family protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAL3_9FIRM
Universal stress family protein {ECO:0000313|EMBL:EDP11666.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L3_128_000G1_scaffold_976_20
unknown

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comp(21842..22051)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_128_000G1_scaffold_976_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22183..23184)
DNA (1002bp) protein (334aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR37_CLOBO
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EES48834.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative xanthine dehydrogenase accessory factor
L3_128_000G1_scaffold_976_22
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23198..23425)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPW5_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41864.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_128_000G1_scaffold_976_23
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23422..24543)
DNA (1122bp) protein (374aa)
Cysteine desulfurase family protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TE24_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:EGL35939.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
cysteine desulfurase
L3_128_000G1_scaffold_976_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(24540..25334)
DNA (795bp) protein (265aa)
Selenium-dependent molybdenum hydroxylase system protein YqeB family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPX6_9FIRM
Selenium-dependent molybdenum hydroxylase system protein YqeB family {ECO:0000313|EMBL:CCZ24261.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
selenium-dependent molybdenum hydroxylase system protein
L3_128_000G1_scaffold_976_25
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25331..25924)
DNA (594bp) protein (198aa)
Selenium metabolism protein YedF n=1 Tax=Coprococcus catus GD/7 RepID=D4J736_9FIRM
selenium metabolism protein YedF
Selenium metabolism protein YedF {ECO:0000313|EMBL:CBK80157.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_128_000G1_scaffold_976_26
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25902..26954)
DNA (1053bp) protein (351aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Blautia sp. CAG:52 RepID=R6G2S8_9FIRM
L3_128_000G1_scaffold_976_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27128..27835
DNA (708bp) protein (236aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2L6_9FIRM
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EDS74701.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
MobA-like protein
L3_128_000G1_scaffold_976_28
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27956..29314
DNA (1359bp) protein (453aa)
K+ transport systems, NAD-binding component n=2 Tax=[Eubacterium] cylindroides RepID=D4JG06_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBK89128.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L3_128_000G1_scaffold_976_29
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

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29298..30794
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R7A834_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD51659.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
hypothetical protein
L3_128_000G1_scaffold_976_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30892..31992)
DNA (1101bp) protein (367aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2L7_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDS74702.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
branched-chain amino acid transport system II carrier protein
Displaying items 1-30 of 39 in total

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