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L3_128_000G1_scaffold_996

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_996_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

334..564
DNA (231bp) protein (77aa)
UPF0291 protein CLOSPI_01229 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X2_9FIRM
UPF0291 protein CLOSPI_01229 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ynzC; hypothetical protein
L3_128_000G1_scaffold_996_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

652..2628
DNA (1977bp) protein (659aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transketolase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X3_9FIRM
transketolase
L3_128_000G1_scaffold_996_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2740..3120
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74916.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_996_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3124..3327
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74917.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3350..3970
DNA (621bp) protein (207aa)
Phosphoglycerate mutase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X6_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDS74918.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
phosphoglycerate mutase family protein
L3_128_000G1_scaffold_996_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4167..4766)
DNA (600bp) protein (200aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X7_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
plsY; acyl-phosphate--glycerol-3-phosphate acyltransferase
L3_128_000G1_scaffold_996_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4933..6861
DNA (1929bp) protein (643aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00939}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00939};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00939}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
DNA topoisomerase 4 subunit B n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X8_9FIRM
gyrB; DNA gyrase subunit B
L3_128_000G1_scaffold_996_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6874..9423
DNA (2550bp) protein (850aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00937};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
parC; DNA topoisomerase 4 subunit A (EC:5.99.1.3)
DNA topoisomerase 4 subunit A n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1X9_9FIRM
L3_128_000G1_scaffold_996_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9437..10123)
DNA (687bp) protein (229aa)
RNA polymerase sigma factor n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
RNA polymerase sigma 70
L3_128_000G1_scaffold_996_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10257..11354
DNA (1098bp) protein (366aa)
Ribosome biogenesis GTPase YqeH n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y1_9FIRM
Ribosome biogenesis GTPase YqeH {ECO:0000313|EMBL:EDS74923.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
GTPase YqeH
L3_128_000G1_scaffold_996_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11369..11656
DNA (288bp) protein (96aa)
RNA-binding protein, YhbY family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y2_9FIRM
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EDS74924.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11653..12753
DNA (1101bp) protein (367aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y3_9FIRM
MCYN0162; Putative nicotinate-nucleotide adenylyltransferase
L3_128_000G1_scaffold_996_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12746..13090
DNA (345bp) protein (115aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y4_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rsfS; ribosomal silencing factor RsfS
L3_128_000G1_scaffold_996_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13090..13812
DNA (723bp) protein (241aa)
putative methyltransferase (EC:2.1.1.-)
Methyltransferase domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y5_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDS74927.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_996_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13812..14501
DNA (690bp) protein (230aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
5'-methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y6_9FIRM
L3_128_000G1_scaffold_996_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14505..16838
DNA (2334bp) protein (778aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDS74929.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDS74929.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
protease (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y7_9FIRM
L3_128_000G1_scaffold_996_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16953..17282
DNA (330bp) protein (110aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS74930.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
XRE family transcriptional regulator
L3_128_000G1_scaffold_996_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17418..17732
DNA (315bp) protein (105aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Y9_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDS74931.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_128_000G1_scaffold_996_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17822..18139
DNA (318bp) protein (106aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z0_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDS74932.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_128_000G1_scaffold_996_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18155..18547
DNA (393bp) protein (131aa)
UPF0237 protein CLOSPI_01248 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z1_9FIRM
UPF0237 protein CLOSPI_01248 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18562..19926
DNA (1365bp) protein (455aa)
UPF0210 protein CLOSPI_01249 n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z2_9FIRM
UPF0210 protein CLOSPI_01249 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19968..21197
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74935.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21205..22938
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74936.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23024..23770
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74937.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_128_000G1_scaffold_996_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23871..24224
DNA (354bp) protein (118aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS74938.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Predicted transcriptional regulators
L3_128_000G1_scaffold_996_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24376..24645)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74939.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_996_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24658..25839)
DNA (1182bp) protein (394aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
deoB; Phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z8_9FIRM
L3_128_000G1_scaffold_996_28
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25849..26757)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1Z9_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
xerD; tyrosine recombinase XerD
L3_128_000G1_scaffold_996_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26823..27386)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C200_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74942.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_128_000G1_scaffold_996_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27437..28639)
DNA (1203bp) protein (401aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
DNA polymerase IV n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C201_9FIRM
nucleotidyltransferase/DNA polymerase
Displaying items 1-30 of 42 in total

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