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L3_128_000G1_scaffold_1570

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1570_1
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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53..517
DNA (465bp) protein (155aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B964_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84914.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_1570_2
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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581..1882
DNA (1302bp) protein (434aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B963_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EGG84913.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ypnP; multidrug resistance protein YpnP
L3_128_000G1_scaffold_1570_3
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1971..2672
DNA (702bp) protein (234aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B962_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84912.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_1570_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2727..2993
DNA (267bp) protein (89aa)
Sporulation protein YqfC n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B961_9FIRM
Sporulation protein YqfC {ECO:0000313|EMBL:EGG84911.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
sporulation protein YqfC
L3_128_000G1_scaffold_1570_5
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3007..4242
DNA (1236bp) protein (412aa)
Sporulation protein YqfD n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B960_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:EGG84910.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
sporulation protein YqfD
L3_128_000G1_scaffold_1570_6
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4243..5229
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B959_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84909.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L3_128_000G1_scaffold_1570_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5229..5723
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Endoribonuclease YbeY n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B958_9FIRM
conserved hypothetical protein TIGR00043
L3_128_000G1_scaffold_1570_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5743..7410
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B957_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84907.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_128_000G1_scaffold_1570_9
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7411..8229
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B956_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84906.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
phosphomethylpyrimidine kinase type-1
L3_128_000G1_scaffold_1570_10
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8276..8629
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B955_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84905.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_1570_11
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8655..8876
DNA (222bp) protein (74aa)
UPF0291 protein HMPREF9477_00631 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B954_9FIRM
UPF0291 protein HMPREF9477_00631 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_1570_12
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8854..9405
DNA (552bp) protein (184aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B953_9FIRM
L3_128_000G1_scaffold_1570_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9402..9581
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B952_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84902.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_1570_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9666..11123
DNA (1458bp) protein (486aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B951_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_128_000G1_scaffold_1570_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11207..11623
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B950_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84900.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Predicted membrane protein
L3_128_000G1_scaffold_1570_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11720..14371
DNA (2652bp) protein (884aa)
DNA mismatch repair protein MutS n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B949_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA mismatch repair protein MutS
L3_128_000G1_scaffold_1570_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14390..16306
DNA (1917bp) protein (639aa)
DNA mismatch repair protein MutL n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B948_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA mismatch repair protein MutL
L3_128_000G1_scaffold_1570_18
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16311..17261
DNA (951bp) protein (317aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B947_9FIRM
L3_128_000G1_scaffold_1570_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17255..18541
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B946_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84896.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L3_128_000G1_scaffold_1570_20
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18554..19792
DNA (1239bp) protein (413aa)
HI0933 family flavoprotein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B945_9FIRM
HI0933 family flavoprotein {ECO:0000313|EMBL:EGG84895.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
conserved hypothetical protein TIGR00275
L3_128_000G1_scaffold_1570_21
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19785..21377
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B944_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84894.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
FAD dependent oxidoreductase
L3_128_000G1_scaffold_1570_22
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21470..22171
DNA (702bp) protein (234aa)
DNA repair protein RadC n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B943_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EGG84893.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA replication and repair protein RadC
L3_128_000G1_scaffold_1570_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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22191..23213
DNA (1023bp) protein (341aa)
MreB/Mrl family cell shape determining protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B942_9FIRM
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EGG84892.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Actin-like ATPase involved in cell morphogenesis
L3_128_000G1_scaffold_1570_24
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23215..24078
DNA (864bp) protein (288aa)
Cell shape-determining protein MreC n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B941_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
rod shape-determining protein MreC
L3_128_000G1_scaffold_1570_25
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24092..24622
DNA (531bp) protein (177aa)
Rod shape-determining protein MreD n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B940_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:EGG84890.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
rod shape-determining protein MreD
L3_128_000G1_scaffold_1570_26
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24615..27485
DNA (2871bp) protein (957aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B939_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84889.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
pbpA1; penicillin-binding protein PbpA1
L3_128_000G1_scaffold_1570_27
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27506..28189
DNA (684bp) protein (228aa)
Probable septum site-determining protein MinC n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B938_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Septum formation inhibitor
L3_128_000G1_scaffold_1570_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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28171..28347
DNA (177bp) protein (59aa)
Site-determining protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B937_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
minD; septum site-determining protein MinD
Displaying 28 items

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