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L3_128_000G1_scaffold_1666

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1666_1
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..479
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K914_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB67544.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
ATPase AAA
L3_128_000G1_scaffold_1666_2
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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485..1141
DNA (657bp) protein (219aa)
Putative TIGR02646 family protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAI8_BLAHA
Putative TIGR02646 family protein {ECO:0000313|EMBL:EEX20986.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L3_128_000G1_scaffold_1666_3
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1401..2210
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83033.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
oxidoreductase
L3_128_000G1_scaffold_1666_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2230..3000
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83032.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_1666_5
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3118..4746
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83031.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
cell envelope-related function transcriptional attenuator common domain
L3_128_000G1_scaffold_1666_6
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4810..5313
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB71_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
transcription elongation factor GreA
L3_128_000G1_scaffold_1666_7
unknown

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5288..5380
DNA (93bp) protein (31aa)

This feature has no annotations

L3_128_000G1_scaffold_1666_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5438..6151
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83029.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
IMP cyclohydrolase-like protein.
L3_128_000G1_scaffold_1666_9
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6163..7338
DNA (1176bp) protein (392aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83028.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_1666_10
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7419..8795
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83027.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
dipeptidase
L3_128_000G1_scaffold_1666_11
unknown

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8865..9146
DNA (282bp) protein (94aa)

This feature has no annotations

L3_128_000G1_scaffold_1666_12
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9143..9490
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PLF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88567.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_128_000G1_scaffold_1666_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9680..11026
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB67_9FIRM
L3_128_000G1_scaffold_1666_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11072..11953)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83025.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_1666_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12037..13332
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB65_9FIRM
L3_128_000G1_scaffold_1666_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13384..13626
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB64_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EGG83023.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
protein translocase, SecG subunit
L3_128_000G1_scaffold_1666_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13706..15832
DNA (2127bp) protein (709aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB63_9FIRM
L3_128_000G1_scaffold_1666_18
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15837..16304
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB62_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
SsrA-binding protein
L3_128_000G1_scaffold_1666_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16313..16546
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83020.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_1666_20
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17095..17871
DNA (777bp) protein (259aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB60_9FIRM
L3_128_000G1_scaffold_1666_21
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17931..18500
DNA (570bp) protein (190aa)
Maf-like protein HMPREF9477_01179 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB59_9FIRM
Maf-like protein HMPREF9477_01179 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
MAF protein
L3_128_000G1_scaffold_1666_22
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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18518..19177
DNA (660bp) protein (220aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
HAD hydrolase, family IA n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB58_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EGG83017.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_1666_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19224..20123)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XZ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57483.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
L3_128_000G1_scaffold_1666_24
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20128..20988)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83016.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Predicted SAM-dependent methyltransferases
L3_128_000G1_scaffold_1666_25
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21166..21768
DNA (603bp) protein (201aa)
Selenium metabolism protein YedF n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB56_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:EGG83015.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
selenium metabolism protein YedF
L3_128_000G1_scaffold_1666_26
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21878..22834
DNA (957bp) protein (319aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
selenium donor protein (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB55_9FIRM
L3_128_000G1_scaffold_1666_27
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22847..24259
DNA (1413bp) protein (471aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
selA; L-seryl-tRNA(Sec) selenium transferase SelA (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB54_9FIRM
L3_128_000G1_scaffold_1666_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24290..26203
DNA (1914bp) protein (638aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB53_9FIRM
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EGG83012.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
selB; selenocysteine-specific elongation factor SelB
L3_128_000G1_scaffold_1666_29
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26203..26994
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83011.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
transcriptional regulator, LysR family
Displaying 29 items

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