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L3_128_000G1_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_445_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43..498)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YUV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55574.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
transposase IS200-family protein
L3_128_000G1_scaffold_445_2
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(738..1370)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88471.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L3_128_000G1_scaffold_445_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1491..4376)
DNA (2886bp) protein (962aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D9A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73407.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
beta-N-acetylglucosaminidase
L3_128_000G1_scaffold_445_4
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4619..9670)
DNA (5052bp) protein (1684aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MB85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67941.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
cell wall binding protein
L3_128_000G1_scaffold_445_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9796..10665)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6S6P6_9FIRM
Nucleoside hydrolase {ECO:0000313|EMBL:KEZ91021.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_128_000G1_scaffold_445_6
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10646..11677)
DNA (1032bp) protein (344aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R838_CLOSW
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EXG85512.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC transporter
L3_128_000G1_scaffold_445_7
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11697..12509)
DNA (813bp) protein (271aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dorea sp. CAG:105 RepID=R5CZM9_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCX73400.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
binding-protein-dependent transport system inner membrane protein
L3_128_000G1_scaffold_445_8
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12506..13375)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZM4_9CLOT
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:EXG85510.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L3_128_000G1_scaffold_445_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13377..14618)
DNA (1242bp) protein (414aa)
ABC transporter, solute-binding protein n=2 Tax=Clostridiales RepID=B0NIW1_CLOSV
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS05406.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC transporter substrate-binding protein
L3_128_000G1_scaffold_445_10
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14639..15979)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R832_CLOSW
Transferase 1, rSAM/selenodomain-associated/transferase 2, rSAM/selenodomain-associated {ECO:0000313|EMBL:EXG85506.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_128_000G1_scaffold_445_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15976..16665)
DNA (690bp) protein (230aa)
SNARE-like domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NH80_CLOSV
SNARE-like domain protein {ECO:0000313|EMBL:EDS06090.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_128_000G1_scaffold_445_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16667..17638)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NH79_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06089.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
iron-sulfur binding reductase
L3_128_000G1_scaffold_445_13
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17628..18308)
DNA (681bp) protein (227aa)
SNARE-like domain protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TA40_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:CDC55642.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L3_128_000G1_scaffold_445_14
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18320..19303)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6ME50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84252.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
aminoglycoside phosphotransferase
L3_128_000G1_scaffold_445_15
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19254..20321)
DNA (1068bp) protein (356aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Clostridiales RepID=B0N9P3_CLOSV
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EDS08608.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_128_000G1_scaffold_445_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20302..21252)
DNA (951bp) protein (317aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Clostridiales RepID=A7B7E8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66364.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_128_000G1_scaffold_445_17
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21303..22265
DNA (963bp) protein (321aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridiales RepID=B0N9P9_CLOSV
Glycosyl transferase family 2 {ECO:0000313|EMBL:KEZ91598.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
family 2 glycosyl transferase
L3_128_000G1_scaffold_445_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22254..24686)
DNA (2433bp) protein (811aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN75901.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN75901.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7F8_RUMGN
Predicted glycosyltransferases
L3_128_000G1_scaffold_445_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24687..25427)
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHD8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM62898.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC transporter-like protein
L3_128_000G1_scaffold_445_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25436..26200)
DNA (765bp) protein (255aa)
ABC-2 type transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHD9_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC transporter
L3_128_000G1_scaffold_445_21
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26278..27204)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LEK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84260.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
thiosulfate sulfurtransferase
L3_128_000G1_scaffold_445_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27201..28535)
DNA (1335bp) protein (445aa)
Glycosyltransferase group 2 family protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LKZ4_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDB84259.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_128_000G1_scaffold_445_23
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28627..29058)
DNA (432bp) protein (144aa)
Oxidoreductase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MHC9_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR01988.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
C_GCAxxG_C_C family protein
L3_128_000G1_scaffold_445_24
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29055..29906)
DNA (852bp) protein (284aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K0I4_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EOS39970.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L3_128_000G1_scaffold_445_25
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29864..30496)
DNA (633bp) protein (211aa)
rfbC2; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R187_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDC38984.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
L3_128_000G1_scaffold_445_26
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30463..31824)
DNA (1362bp) protein (454aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A8D0_NATTJ
phospholipase D/Transphosphatidylase
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ACB84496.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
L3_128_000G1_scaffold_445_27
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32084..32968)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81870.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_445_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32987..34264)
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCA3_9FIRM
Serine-tRNA ligase {ECO:0000313|EMBL:EGG81871.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_445_29
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34287..34808)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81872.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_445_30
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34810..35700)
DNA (891bp) protein (297aa)
ParB-like partition protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCA5_9FIRM
ParB-like partition protein {ECO:0000313|EMBL:EGG81873.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ParB-like partition proteins
Displaying items 1-30 of 57 in total

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