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L3_128_000G1_scaffold_678

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_678_1
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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426..794
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ9_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
30S ribosomal protein S13
L3_128_000G1_scaffold_678_2
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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949..1344
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ8_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
SSU ribosomal protein S11P
L3_128_000G1_scaffold_678_3
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1362..1955
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ7_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
SSU ribosomal protein S4P
L3_128_000G1_scaffold_678_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2019..2978
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ6_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_128_000G1_scaffold_678_5
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3070..3597
DNA (528bp) protein (176aa)
50S ribosomal protein L17 n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ5_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
LSU ribosomal protein L17P
L3_128_000G1_scaffold_678_6
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3681..5429
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82953.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
peptidase S41
L3_128_000G1_scaffold_678_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5451..5723)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82952.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
glutaredoxin-like protein
L3_128_000G1_scaffold_678_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5981..8593
DNA (2613bp) protein (871aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ2_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_678_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8784..9266
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S277_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40742.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
RNA polymerase sigma factor, sigma-70 family
L3_128_000G1_scaffold_678_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9259..9558
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40741.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_128_000G1_scaffold_678_11
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9705..10460
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82950.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Phosphotransferase enzyme family.
L3_128_000G1_scaffold_678_12
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10519..11574)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82949.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_678_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11717..12301
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82948.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_678_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12288..13115
DNA (828bp) protein (276aa)
Cof-like hydrolase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY8_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EGG82947.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
HAD-superfamily hydrolase, subfamily IIB
L3_128_000G1_scaffold_678_15
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13132..13968
DNA (837bp) protein (279aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY7_9FIRM
L3_128_000G1_scaffold_678_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14087..14848
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82945.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_128_000G1_scaffold_678_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14870..15559
DNA (690bp) protein (230aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY5_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EGG82944.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
polar amino acid ABC transporter inner membrane subunit
L3_128_000G1_scaffold_678_18
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15556..16278
DNA (723bp) protein (241aa)
Polar amino acid transport system ATP-binding protein (EC:3.6.3.21)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82943.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_678_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16383..16781
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82942.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_678_20
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16793..17143
DNA (351bp) protein (117aa)
Spx/MgsR family transcriptional regulator n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY2_9FIRM
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:EGG82941.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_128_000G1_scaffold_678_21
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17144..18910
DNA (1767bp) protein (589aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAY1_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EGG82940.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_678_22
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18949..19197)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82938.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_128_000G1_scaffold_678_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19269..19925)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82937.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
PAP2 superfamily.
L3_128_000G1_scaffold_678_24
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20022..20825)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82936.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Glycerophosphoryl diester phosphodiesterase
L3_128_000G1_scaffold_678_25
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20838..21758)
DNA (921bp) protein (307aa)
YegS//BmrU family lipid kinase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX6_9FIRM
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:EGG82935.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_128_000G1_scaffold_678_26
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21980..22414
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82934.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
MarR family transcriptional regulator
L3_128_000G1_scaffold_678_27
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22416..24584
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82933.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_128_000G1_scaffold_678_28
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24577..26421
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82932.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L3_128_000G1_scaffold_678_29
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26851..29499
DNA (2649bp) protein (883aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD17_9FIRM
L3_128_000G1_scaffold_678_30
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29534..31723
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80987.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Displaying items 1-30 of 53 in total

View Taxonomy