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L3_128_000G1_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_157_1
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1920)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZD63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11745.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_157_2
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2283..3278)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZB97_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11303.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
IstB domain-containing protein ATP-binding protein
L3_128_000G1_scaffold_157_3
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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comp(3282..4394)
DNA (1113bp) protein (371aa)
Primosome DnaD subunit n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QEL8_9FIRM
Primosome DnaD subunit {ECO:0000313|EMBL:CDC29336.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
primosome subunit DnaD
L3_128_000G1_scaffold_157_4
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4342..5388)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z2S1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11392.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
glycosyl transferase
L3_128_000G1_scaffold_157_5
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5407..6033)
DNA (627bp) protein (209aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Uracil phosphoribosyltransferase n=1 Tax=Clostridium sp. ASF356 RepID=N1ZBJ8_9CLOT
uracil phosphoribosyltransferase
L3_128_000G1_scaffold_157_6
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6050..6478)
DNA (429bp) protein (143aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Clostridium sp. ASF356 RepID=N1ZFR7_9CLOT
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EMZ11394.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_157_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6512..6955)
DNA (444bp) protein (148aa)
Ribose 5-phosphate isomerase RpiB n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RD95_THETN
RpiB; ribose 5-phosphate isomerase RpiB
Ribose 5-phosphate isomerase RpiB {ECO:0000313|EMBL:KKC30814.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
L3_128_000G1_scaffold_157_8
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(6971..8023)
DNA (1053bp) protein (351aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ACK1_9FIRM
Sua5; translation factor (Sua5)
L3_128_000G1_scaffold_157_9
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8048..8551)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z6F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11396.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
SEC-C motif domain protein
L3_128_000G1_scaffold_157_10
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8675..9109)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z2S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11397.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
UspA domain-containing protein
L3_128_000G1_scaffold_157_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9329..10186)
DNA (858bp) protein (286aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036A7312
peptidyl-prolyl cis-trans isomerase
L3_128_000G1_scaffold_157_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10204..11268)
DNA (1065bp) protein (355aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AL85_9CLOT
L3_128_000G1_scaffold_157_13
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11410..11886
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P8A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20553.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L3_128_000G1_scaffold_157_14
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11922..12566)
DNA (645bp) protein (215aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
integral membrane sensor signal transduction histidine kinase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288CCD9
PAS two-component sensor histidine kinase
L3_128_000G1_scaffold_157_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

12756..13160
DNA (405bp) protein (135aa)
Histidine triad domain protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q8F6_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:CDC29304.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
cell cycle regulation histidine triad (HIT) protein
L3_128_000G1_scaffold_157_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13285..14160)
DNA (876bp) protein (292aa)
PfkB domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M951_9CLOT
PfkB domain protein {ECO:0000313|EMBL:EHJ01768.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
PfkB domain-containing protein
L3_128_000G1_scaffold_157_17
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14304..15326)
DNA (1023bp) protein (341aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MTN6_9FIRM
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:EGS30032.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
Electron transfer flavoprotein, alpha subunit
L3_128_000G1_scaffold_157_18
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15376..16170)
DNA (795bp) protein (265aa)
Electron transfer flavoprotein domain-containing protein n=2 Tax=Anaerostipes RepID=E5VQH1_9FIRM
Electron transfer flavoprotein domain-containing protein {ECO:0000313|EMBL:EFV23949.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
Electron transfer flavoprotein, beta subunit
L3_128_000G1_scaffold_157_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16241..17386)
DNA (1146bp) protein (382aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=2 Tax=Oscillibacter RepID=U2RD15_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERK66414.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_128_000G1_scaffold_157_20
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(17754..18296)
DNA (543bp) protein (181aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
2-5 RNA ligase (EC:6.5.1.1)
2'-5' RNA ligase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AEQ5_9FIRM
L3_128_000G1_scaffold_157_21
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18361..20343)
DNA (1983bp) protein (661aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7Z0_9CLOT
L3_128_000G1_scaffold_157_22
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(20359..21006)
DNA (648bp) protein (216aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Probable transaldolase n=2 Tax=Firmicutes RepID=R6PT38_9FIRM
fructose-6-phosphate aldolase, TalC/MipB family
L3_128_000G1_scaffold_157_23
Selenomonas sp. oral taxon 137, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(21145..21909)
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LMV3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR39753.1}; TaxID=879310 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 137 str. F0430.;"
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component
L3_128_000G1_scaffold_157_24
Selenomonas sp. F0473, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21906..22982)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. F0473 RepID=K9CW81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU71047.1}; TaxID=999423 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. F0473.;"
transport system permease protein
L3_128_000G1_scaffold_157_25
Selenomonas sp. F0473, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22985..24088)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. F0473 RepID=K9CGY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU71048.1}; TaxID=999423 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. F0473.;"
Iron(III) dicitrate-binding protein
L3_128_000G1_scaffold_157_26
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24557..25051)
DNA (495bp) protein (165aa)
Molybdenum cofactor synthesis domain protein n=2 Tax=Oscillibacter RepID=U2R4J5_9FIRM
molybdenum cofactor biosynthesis protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_128_000G1_scaffold_157_27
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25064..26092)
DNA (1029bp) protein (343aa)
ABC transporter related protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TH70_9CLOT
modC; putative molybdate ABC transporter ATP-binding protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_128_000G1_scaffold_157_28
Synergistes jonesii, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(26092..26763)
DNA (672bp) protein (224aa)
Molybdate ABC transporter permease n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I5E9_9CLOT
Molybdate ABC transporter permease {ECO:0000313|EMBL:KEJ93043.1}; TaxID=2754 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes jonesii.;"
modB; putative molybdate ABC transporter permease protein
L3_128_000G1_scaffold_157_29
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26777..27604)
DNA (828bp) protein (276aa)
Molybdate ABC transporter substrate-binding protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2Q5_9CLOT
Molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETA80525.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L3_128_000G1_scaffold_157_30
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(27633..28655)
DNA (1023bp) protein (341aa)
Molybdopterin binding domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZ87_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:CDB87456.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
moeA2; molybdopterin biosynthesis protein MoeA
Displaying items 1-30 of 103 in total

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