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L3_128_000G1_scaffold_225

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_225_1
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..285
DNA (285bp) protein (95aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZDE8_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Translation initiation factor IF-3
L3_128_000G1_scaffold_225_2
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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319..519
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZGR1_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
LSU ribosomal protein L35P
L3_128_000G1_scaffold_225_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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547..900
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=2 Tax=Firmicutes RepID=R6QT27_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
LSU ribosomal protein L20P
L3_128_000G1_scaffold_225_4
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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939..1199
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ABB1_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
30S ribosomal protein S20
L3_128_000G1_scaffold_225_5
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1315..1845)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q894X2_CLOTE
vanZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO35970.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
L3_128_000G1_scaffold_225_6
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1990..2967
DNA (978bp) protein (326aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Germination protease n=1 Tax=Clostridium sp. ASF356 RepID=N1ZI42_9CLOT
GPR endopeptidase
L3_128_000G1_scaffold_225_7
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3014..4447)
DNA (1434bp) protein (478aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Proline--tRNA ligase n=1 Tax=Clostridium sp. ASF356 RepID=N1ZRQ6_9CLOT
prolyl-tRNA synthetase, family I
L3_128_000G1_scaffold_225_8
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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4762..5880
DNA (1119bp) protein (373aa)
Peptidase M29 aminopeptidase II n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AEB1_9FIRM
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:CCX41023.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
peptidase M29 aminopeptidase II
L3_128_000G1_scaffold_225_9
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5978..6850
DNA (873bp) protein (291aa)
spoIIGA; sporulation sigma-E factor-processing peptidase SpoIIGA (EC:3.4.23.-)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Sporulation sigma-E factor-processing peptidase SpoIIGA n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYI2_CLOA9
L3_128_000G1_scaffold_225_10
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6864..7595
DNA (732bp) protein (244aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. ASF356 RepID=N1ZGP6_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
sigE; RNA polymerase sigma-E factor
L3_128_000G1_scaffold_225_11
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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8139..9275
DNA (1137bp) protein (379aa)
Basic membrane protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q7D5_9FIRM
Basic membrane protein {ECO:0000313|EMBL:CDC28904.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
basic membrane protein
L3_128_000G1_scaffold_225_12
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9554..11116
DNA (1563bp) protein (521aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BAK5_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD62444.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ABC transporter ATP-binding protein
L3_128_000G1_scaffold_225_13
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11106..12212
DNA (1107bp) protein (369aa)
Amino acid or sugar ABC transport system permease protein n=2 Tax=Firmicutes RepID=R6PWV8_9FIRM
Amino acid or sugar ABC transport system permease protein {ECO:0000313|EMBL:CDD62443.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
branched-chain amino acid ABC transporter permease
L3_128_000G1_scaffold_225_14
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12212..13144
DNA (933bp) protein (311aa)
Amino acid or sugar ABC transport system permease protein n=2 Tax=Firmicutes RepID=R6PZC4_9FIRM
Amino acid or sugar ABC transport system permease protein {ECO:0000313|EMBL:CDD62442.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
branched-chain amino acid ABC transporter permease
L3_128_000G1_scaffold_225_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

13169..14110
DNA (942bp) protein (314aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PWW4_9FIRM
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CDC28913.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
rihA; ribonucleoside hydrolase 1
L3_128_000G1_scaffold_225_16
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

14110..15045
DNA (936bp) protein (312aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZD1_9FIRM
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CDC28915.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative cytidine/uridine-specific hydrolase
L3_128_000G1_scaffold_225_17
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15079..15825)
DNA (747bp) protein (249aa)
udp1; uridine phosphorylase Udp (EC:2.4.2.3)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium sp. CAG:505 RepID=R7AJV2_9CLOT
Purine nucleoside phosphorylase DeoD-type {ECO:0000313|EMBL:CDD61068.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_000G1_scaffold_225_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

15954..16379
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QT44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC25107.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_128_000G1_scaffold_225_19
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

16393..16845
DNA (453bp) protein (151aa)
PF04657 family protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PWI2_9FIRM
PF04657 family protein {ECO:0000313|EMBL:CDC25109.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_128_000G1_scaffold_225_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16861..17781
DNA (921bp) protein (307aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Sugar kinases ribokinase family n=1 Tax=Clostridium sp. CAG:505 RepID=R7ARM1_9CLOT
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDD61065.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
L3_128_000G1_scaffold_225_21
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

17796..18383
DNA (588bp) protein (196aa)
Putative oxidoreductase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QT48_9FIRM
Putative oxidoreductase {ECO:0000313|EMBL:CDC25112.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative oxidoreductase
L3_128_000G1_scaffold_225_22
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18401..19462
DNA (1062bp) protein (354aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6PL76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD62373.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
ankyrin repeat-containing protein
L3_128_000G1_scaffold_225_23
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

19635..20411
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AIM7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
RNA polymerase sigma subunit RpsG/SigG
L3_128_000G1_scaffold_225_24
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

20534..21076
DNA (543bp) protein (181aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YH86_9FIRM
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:CDD30739.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
transcriptional regulator DhaS
L3_128_000G1_scaffold_225_25
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21094..22140)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LL03_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA50112.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_128_000G1_scaffold_225_26
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22437..22850)
DNA (414bp) protein (138aa)
Rrf2 family protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZES1_9CLOT
Rrf2 family protein {ECO:0000313|EMBL:EMZ11064.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
transcriptional regulator, BadM/Rrf2 family
L3_128_000G1_scaffold_225_27
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23241..25778
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z9D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13667.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L3_128_000G1_scaffold_225_28
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25781..26710
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZI18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13668.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
multidrug ABC transporter ATPase
L3_128_000G1_scaffold_225_29
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26703..27572
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZM69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13669.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L3_128_000G1_scaffold_225_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27579..29135
DNA (1557bp) protein (519aa)
Pectinesterase inhibitor domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDV6_9CLOT
Pectinesterase inhibitor domain protein {ECO:0000313|EMBL:EKY25772.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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