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L3_128_000G1_scaffold_1199

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1199_1
Staphylococcus equorum, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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45..893
DNA (849bp) protein (283aa)
Sugar phosphate isomerase n=1 Tax=Staphylococcus equorum UMC-CNS-924 RepID=U1RNF1_9STAP
Xylose isomerase-like protein {ECO:0000313|EMBL:CCI60775.1}; TaxID=1159488 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus equorum subsp. equorum Mu2.;"
Sugar phosphate isomerases/epimerases
L3_128_000G1_scaffold_1199_2
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(960..1130)
DNA (171bp) protein (57aa)
Transcriptional regulator n=1 Tax=Blautia sp. CAG:37 RepID=R7JKG1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDE64380.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_128_000G1_scaffold_1199_3
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1151..3832)
DNA (2682bp) protein (894aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Blautia sp. CAG:37 RepID=R7JLA2_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
ATP-dependent chaperone ClpB
L3_128_000G1_scaffold_1199_4
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3964..6201)
DNA (2238bp) protein (746aa)
Glycoside hydrolase family 95 Gh95A n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S367_BUTPB
Glycoside hydrolase family 95 Gh95A {ECO:0000313|EMBL:ADL35849.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
gh95A; glycoside hydrolase family 95 Gh95A
L3_128_000G1_scaffold_1199_5
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(6174..7514)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BIW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65078.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
MATE family multidrug resistance protein
L3_128_000G1_scaffold_1199_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7922..9304
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46175.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_128_000G1_scaffold_1199_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9388..10761)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=5 Tax=Clostridiales RepID=A5KQQ7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV18407.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
MATE efflux family protein
L3_128_000G1_scaffold_1199_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10856..12490)
DNA (1635bp) protein (545aa)
Amidohydrolase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYU2_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:EEG55760.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Predicted metal-dependent hydrolase with the TIM-barrel fold
L3_128_000G1_scaffold_1199_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12657..13502)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000367503C
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CCZ59827.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_128_000G1_scaffold_1199_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13632..16166)
DNA (2535bp) protein (845aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques CAG:61 RepID=R5QCE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26268.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_128_000G1_scaffold_1199_11
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16472..16906
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD107 RepID=J8J3D3_BACCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJI16677.1}; TaxID=1396 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus.;"
L3_128_000G1_scaffold_1199_12
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17027..18322)
DNA (1296bp) protein (432aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=1 Tax=Blautia sp. CAG:37 RepID=R7JKI0_9FIRM
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CDE64405.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_128_000G1_scaffold_1199_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18801..19880)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VN90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85543.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
membrane lipoprotein TmpC
L3_128_000G1_scaffold_1199_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19948..20613)
DNA (666bp) protein (222aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
deoC; deoxyribose-phosphate aldolase DeoC (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCY6_9FIRM
L3_128_000G1_scaffold_1199_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20815..21213)
DNA (399bp) protein (133aa)
cdd; cytidine deaminase (EC:3.5.4.5)
cytidine deaminase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B43E1B
Cytidine deaminase {ECO:0000313|EMBL:CDD56890.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_128_000G1_scaffold_1199_16
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21333..23852)
DNA (2520bp) protein (840aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JKI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64410.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_128_000G1_scaffold_1199_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(24029..24967)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R1L3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC00472.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_128_000G1_scaffold_1199_18
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25185..26873)
DNA (1689bp) protein (563aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CBL21437.1};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LNM6_9FIRM
L3_128_000G1_scaffold_1199_19
Bacillus niacini, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27419..29491
DNA (2073bp) protein (691aa)
Glycoside hydrolase family protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6BUS9_9BACI
Glycoside hydrolase {ECO:0000313|EMBL:KGM44984.1}; TaxID=86668 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus niacini.;"
beta-glucosidase-like glycosyl hydrolase
L3_128_000G1_scaffold_1199_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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29547..31253
DNA (1707bp) protein (569aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
nag3; beta-N-acetylglucosaminidase/beta-glucosidase (EC:3.2.1.52)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X6T2_9CLOT
L3_128_000G1_scaffold_1199_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31357..32250)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MKE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71151.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_128_000G1_scaffold_1199_22
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32480..33568)
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QSZ5_9FIRM
Signal transduction histidine kinase
L3_128_000G1_scaffold_1199_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33561..34220)
DNA (660bp) protein (220aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHL6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS00890.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Displaying 23 items

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