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L3_128_000G1_scaffold_1353

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1353_1
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(225..1094)
DNA (870bp) protein (290aa)
Transcriptional regulator, LysR family n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NWF4_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF92493.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
LysR family transcriptional regulator
L3_128_000G1_scaffold_1353_2
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1273..2127
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6MZD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB91177.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
oxidoreductase
L3_128_000G1_scaffold_1353_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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2352..3740
DNA (1389bp) protein (463aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZK94_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDD30882.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
putative efflux protein, MATE family
L3_128_000G1_scaffold_1353_4
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3763..4647
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J9H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24388.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
transcriptional regulator, LysR family
L3_128_000G1_scaffold_1353_5
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4662..5732)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00035FEDDB
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ88712.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
L3_128_000G1_scaffold_1353_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5905..7056
DNA (1152bp) protein (384aa)
Exonuclease SbcCD, D subunit n=2 Tax=Coprococcus RepID=C0B5A3_9FIRM
Exonuclease SbcCD D subunit {ECO:0000313|EMBL:CDB85554.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_128_000G1_scaffold_1353_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7053..9875
DNA (2823bp) protein (941aa)
M protein repeat protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LDJ8_9FIRM
M protein repeat protein {ECO:0000313|EMBL:CDB85553.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
sbcC; exonuclease SbcC
L3_128_000G1_scaffold_1353_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10441..11190
DNA (750bp) protein (250aa)
Cobalt transport protein CbiM n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7C0_9CLOT
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
cobalamin biosynthesis protein CbiM
L3_128_000G1_scaffold_1353_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11192..11515
DNA (324bp) protein (108aa)
Cobalt transport protein CbiN n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSZ0_9CLOT
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type cobalt transport system, periplasmic component
L3_128_000G1_scaffold_1353_10
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11527..12294
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH95_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50914.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
cobalt ABC transporter, permease protein CbiQ
L3_128_000G1_scaffold_1353_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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12297..13148
DNA (852bp) protein (284aa)
cobalt chelatase n=1 Tax=Blautia producta RepID=UPI0003791A25
Cobalt chelatase {ECO:0000313|EMBL:CCZ33396.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
cobalt transport protein ATP-binding subunit
L3_128_000G1_scaffold_1353_12
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13154..13753)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JSX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66688.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L3_128_000G1_scaffold_1353_13
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13923..14651
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JV60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66687.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
RNA polymerase sigma factor sigma-70 family protein
L3_128_000G1_scaffold_1353_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14846..16216)
DNA (1371bp) protein (457aa)
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Tryptophan synthase beta chain n=4 Tax=Roseburia RepID=D4KQ55_9FIRM
L3_128_000G1_scaffold_1353_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(16237..16758)
DNA (522bp) protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHB6_9FIRM
L3_128_000G1_scaffold_1353_16
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17009..18631
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6GG82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE01494.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_128_000G1_scaffold_1353_17
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18709..19815
DNA (1107bp) protein (369aa)
Transcriptional regulators n=1 Tax=Blautia sp. CAG:37 RepID=R7JRU1_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CDE66684.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Transcriptional regulators
L3_128_000G1_scaffold_1353_18
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19999..21663
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JSX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66683.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
alpha amylase
L3_128_000G1_scaffold_1353_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21715..24108
DNA (2394bp) protein (798aa)
Glycosyl hydrolase, family 31 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CUE5_9CLOT
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:ERI72872.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases
L3_128_000G1_scaffold_1353_20
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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24612..26105
DNA (1494bp) protein (498aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9K6U8_9FIRM
L3_128_000G1_scaffold_1353_21
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26140..27582
DNA (1443bp) protein (481aa)
Predicted dehydrogenase n=1 Tax=Blautia sp. CAG:257 RepID=R5WR06_9FIRM
Predicted dehydrogenase {ECO:0000313|EMBL:CDA05828.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Predicted dehydrogenase
L3_128_000G1_scaffold_1353_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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27579..28940
DNA (1362bp) protein (454aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJW3_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDM62048.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
sarcosine oxidase subunit alpha
L3_128_000G1_scaffold_1353_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28944..29318
DNA (375bp) protein (125aa)
Uncharacterized protein with conserved CXXC pairs n=1 Tax=Clostridium sp. CAG:58 RepID=R6RXQ3_9CLOT
Uncharacterized protein with conserved CXXC pairs {ECO:0000313|EMBL:CDC50129.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Uncharacterized protein with conserved CXXC pairs
L3_128_000G1_scaffold_1353_24
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29414..30589)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C2T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59167.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
phosphoribosylglycinamide synthetase, ATP-grasp (A) domain-containing protein
L3_128_000G1_scaffold_1353_25
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30586..31554)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C6E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59166.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
glycosyl transferase
L3_128_000G1_scaffold_1353_26
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(31568..31708)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VB87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91564.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
pyridoxal phosphate-dependent deaminase
Displaying 26 items

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