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L3_128_000G1_scaffold_2323

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2323_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..703
DNA (702bp) protein (234aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Blautia sp. CAG:37 RepID=R7JTQ4_9FIRM
L3_128_000G1_scaffold_2323_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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693..1208
DNA (516bp) protein (172aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QV89_9FIRM
L3_128_000G1_scaffold_2323_3
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1378..2304
DNA (927bp) protein (309aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EED7_9FIRM
L3_128_000G1_scaffold_2323_4
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2460..3113
DNA (654bp) protein (218aa)
Cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Blautia sp. CAG:37 RepID=R7JTK2_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDE66976.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L3_128_000G1_scaffold_2323_5
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3341..4825
DNA (1485bp) protein (495aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JM08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64955.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L3_128_000G1_scaffold_2323_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4822..5589
DNA (768bp) protein (256aa)
Streptomycin 3'-adenylyltransferase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K7J3_9FIRM
Streptomycin 3'-adenylyltransferase {ECO:0000313|EMBL:EGN41635.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
nucleotidyltransferase family protein
L3_128_000G1_scaffold_2323_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5580..7685
DNA (2106bp) protein (702aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK05_9CLOT
L3_128_000G1_scaffold_2323_8
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7688..8530
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HP36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96943.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_128_000G1_scaffold_2323_9
unknown

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8634..8747
DNA (114bp) protein (38aa)

This feature has no annotations

L3_128_000G1_scaffold_2323_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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8861..10648
DNA (1788bp) protein (596aa)
ABC transporter n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYZ5_9FIRM
ABC transporter {ECO:0000313|EMBL:CCZ34195.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC transporter
L3_128_000G1_scaffold_2323_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

10639..12489
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RHD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34196.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC transporter
L3_128_000G1_scaffold_2323_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12538..13386
DNA (849bp) protein (283aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GCM1_9FIRM
L3_128_000G1_scaffold_2323_13
Lactobacillus iners, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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13420..14205
DNA (786bp) protein (262aa)
Acetyltransferase, GNAT family n=1 Tax=Lactobacillus iners LEAF 2053A-b RepID=E3BU41_9LACO
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFQ47269.1}; TaxID=879301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus iners LEAF 2053A-b.;"
N-acetyltransferase GCN5
L3_128_000G1_scaffold_2323_14
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14216..14779
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YEM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60695.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_128_000G1_scaffold_2323_15
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14855..15301
DNA (447bp) protein (149aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.57)
GNAT family acetyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQF1_9CLOT
GNAT family acetyltransferase {ECO:0000313|EMBL:CDA77920.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_2323_16
Prevotella sp. CAG:487, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15447..15680
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:487 RepID=R5PBF6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ13875.1}; TaxID=1262928 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:487.;"
L3_128_000G1_scaffold_2323_17
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15769..17100)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IMM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23174.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_128_000G1_scaffold_2323_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17113..18102)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IMM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23174.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_128_000G1_scaffold_2323_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18099..18782)
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJG8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB77328.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_128_000G1_scaffold_2323_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18856..19287)
DNA (432bp) protein (144aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJG3_9FIRM
L3_128_000G1_scaffold_2323_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19309..19893)
DNA (585bp) protein (195aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJG3_9FIRM
sensor histidine kinase
L3_128_000G1_scaffold_2323_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19893..20594)
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJG2_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFB77322.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA-binding response regulator
Displaying 22 items

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