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L3_128_000G1_scaffold_2441

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2441_1
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..103)
DNA (102bp) protein (34aa)
Zinc-binding dehydrogenase n=3 Tax=Anaerostipes RepID=E5VYX6_9FIRM
Zinc-binding dehydrogenase {ECO:0000313|EMBL:CDC37876.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L3_128_000G1_scaffold_2441_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(143..499)
DNA (357bp) protein (119aa)
Putative ribosome-associated heat shock protein Hsp15 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1B4_9FIRM
Putative ribosome-associated heat shock protein Hsp15 {ECO:0000313|EMBL:CCZ34970.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L3_128_000G1_scaffold_2441_3
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(510..782)
DNA (273bp) protein (91aa)
DNA-binding protein HU n=1 Tax=Blautia sp. CAG:37 RepID=R7JQH0_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:CDE65876.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Bacterial nucleoid DNA-binding protein
L3_128_000G1_scaffold_2441_4
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1165..1926)
DNA (762bp) protein (254aa)
MazG family protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZJ6_THEOJ
MazG family protein
MazG family protein {ECO:0000313|EMBL:ADL06894.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
L3_128_000G1_scaffold_2441_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1926..3659)
DNA (1734bp) protein (578aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
phosphoglucomutase n=1 Tax=Blautia producta RepID=UPI000364CE64
Uncharacterized protein {ECO:0000313|EMBL:CDC48376.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_128_000G1_scaffold_2441_6
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3735..4709)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JPI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65875.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
CotS family spore coat protein
L3_128_000G1_scaffold_2441_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4878..6536)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035D7528
Uncharacterized protein {ECO:0000313|EMBL:CCY32792.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
peptidase M56 BlaR1
L3_128_000G1_scaffold_2441_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6553..6933)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003625E4B
Penicillinase repressor {ECO:0000313|EMBL:CCY32791.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative transcriptional regulator
L3_128_000G1_scaffold_2441_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7612..8136
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KX08_FINMA
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:BAG08716.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
L3_128_000G1_scaffold_2441_10
unknown

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8208..8417
DNA (210bp) protein (70aa)

This feature has no annotations

L3_128_000G1_scaffold_2441_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8463..8708
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MIH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY84862.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_128_000G1_scaffold_2441_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8732..9352
DNA (621bp) protein (207aa)
Hydrolase, NUDIX family n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G8V7_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDR46111.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
NUDIX hydrolase
L3_128_000G1_scaffold_2441_13
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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9345..10280
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Lactococcus lactis subsp. cremoris KW2 RepID=T2F5N2_LACLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGV73026.1}; TaxID=1295826 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. cremoris KW2.;"
L3_128_000G1_scaffold_2441_14
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10320..11000)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WWK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA04414.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_128_000G1_scaffold_2441_15
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11118..11909)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N4E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78194.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
aminoglycoside phosphotransferase
L3_128_000G1_scaffold_2441_16
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11911..13254)
DNA (1344bp) protein (448aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.3.- 3.1.4.-)
Putative domain HDIG-containing protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JQJ6_9FIRM
Putative domain HDIG-containing protein {ECO:0000313|EMBL:CDE65873.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L3_128_000G1_scaffold_2441_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13452..13940)
DNA (489bp) protein (163aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=4 Tax=Lachnospiraceae RepID=A5KQW7_9FIRM
dCMP deaminase {ECO:0000313|EMBL:EFV18258.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_128_000G1_scaffold_2441_18
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13986..14615)
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Blautia sp. CAG:37 RepID=R7JPK4_9FIRM
L3_128_000G1_scaffold_2441_19
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14673..15110)
DNA (438bp) protein (146aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EE97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE00676.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_128_000G1_scaffold_2441_20
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15107..15568)
DNA (462bp) protein (154aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Blautia sp. CAG:37 PF4_9FIRM">RepID=R7JPF4_9FIRM
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:CDE65840.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L3_128_000G1_scaffold_2441_21
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15620..16669)
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JQG9_9FIRM
Sua5/YciO/YrdC/YwlC family protein
L3_128_000G1_scaffold_2441_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16896..17576)
DNA (681bp) protein (227aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YN34_9FIRM
L3_128_000G1_scaffold_2441_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17640..18638)
DNA (999bp) protein (333aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YN34_9FIRM
L3_128_000G1_scaffold_2441_24
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18839..19363)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JPH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65834.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Predicted membrane protein
L3_128_000G1_scaffold_2441_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19603..19959)
DNA (357bp) protein (119aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RSA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16488.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
AraC family transcriptional regulator
Displaying 25 items

View Taxonomy