ggKbase home page

L3_128_000G1_scaffold_2446

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2446_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JU25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67098.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
EamA-like transporter family.
L3_128_000G1_scaffold_2446_2
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(304..663)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JT02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67099.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
EamA-like transporter family.
L3_128_000G1_scaffold_2446_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(681..1448)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60586.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_128_000G1_scaffold_2446_4
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(1488..2519)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CGR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64462.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
hypothetical protein
L3_128_000G1_scaffold_2446_5
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2525..3583)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80608.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
family 2 glycosyl transferase
L3_128_000G1_scaffold_2446_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(3576..4979)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VB94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC91574.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L3_128_000G1_scaffold_2446_7
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5116..7968)
DNA (2853bp) protein (951aa)
Bacterial membrane protein YfhO n=1 Tax=Blautia sp. CAG:237 RepID=R6KRV3_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:CDB77978.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Predicted membrane protein
L3_128_000G1_scaffold_2446_8
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7965..9029)
DNA (1065bp) protein (355aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46)
Dehydratase/epimerase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MQP5_9FIRM
Dehydratase/epimerase {ECO:0000313|EMBL:CDF02975.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L3_128_000G1_scaffold_2446_9
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9783)
DNA (735bp) protein (245aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ruminococcus sp. CAG:624 PF7_9FIRM">RepID=R7MPF7_9FIRM
L3_128_000G1_scaffold_2446_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9784..10836)
DNA (1053bp) protein (351aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0X4_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK91495.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_128_000G1_scaffold_2446_11
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11078..12145
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80609.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
WcaA; cell wall biogenesis glycosyltransferase
L3_128_000G1_scaffold_2446_12
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12247..13395)
DNA (1149bp) protein (383aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC (EC:2.7.8.12)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Clostridium sp. M62/1 RepID=D4CE45_9CLOT
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EFE12039.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_128_000G1_scaffold_2446_13
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(13409..14275)
DNA (867bp) protein (289aa)
LPS biosynthesis protein (EC:2.7.8.-)
LPS biosynthesis protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WBI8_9FIRM
LPS biosynthesis protein {ECO:0000313|EMBL:CDC91572.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_128_000G1_scaffold_2446_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(14292..15689)
DNA (1398bp) protein (466aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V054_9FIRM
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CDC91573.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_128_000G1_scaffold_2446_15

Not on your lists

comp(15673..17502)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI00031E622B
Choline/ethanolamine kinase family protein {ECO:0000313|EMBL:ETJ16696.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
choline/ethanolamine kinase family protein
L3_128_000G1_scaffold_2446_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17611..18771)
DNA (1161bp) protein (387aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N835_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CCZ32266.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
diguanylate cyclase
L3_128_000G1_scaffold_2446_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

19170..19922
DNA (753bp) protein (251aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REV3_9FIRM
ATP-dependent DNA helicase rep
Displaying 17 items

View Taxonomy