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L3_128_000G1_scaffold_2867

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2867_1
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..599
DNA (597bp) protein (199aa)
HAMP domain protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CC35_9CLOT
HAMP domain protein {ECO:0000313|EMBL:CDA69041.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
histidine kinase
L3_128_000G1_scaffold_2867_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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596..1891
DNA (1296bp) protein (432aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ17_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG75095.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
sugar ABC transporter periplasmic protein
L3_128_000G1_scaffold_2867_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2006..3325
DNA (1320bp) protein (440aa)
ABC transporter, solute-binding protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G5I8_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDR47038.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_128_000G1_scaffold_2867_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3388..4230
DNA (843bp) protein (281aa)
ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ15_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG75093.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
carbohydrate ABC transporter membrane protein 1
L3_128_000G1_scaffold_2867_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4231..5067
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=2 Tax=Dorea RepID=A6BJ18_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62351.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_128_000G1_scaffold_2867_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5337..6755
DNA (1419bp) protein (473aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH1_9FIRM
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EHL65755.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
uidB; glucuronide permease
L3_128_000G1_scaffold_2867_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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6889..8745
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QV92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32720.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Predicted ATP-dependent endonuclease of the OLD family
L3_128_000G1_scaffold_2867_8
unknown

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8856..9113
DNA (258bp) protein (86aa)

This feature has no annotations

L3_128_000G1_scaffold_2867_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9163..10176
DNA (1014bp) protein (338aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AZS3_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERI65605.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
transcriptional regulator
L3_128_000G1_scaffold_2867_10
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10310..12109
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IY19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT25479.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
ams; amylosucrase
L3_128_000G1_scaffold_2867_11
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12155..14353
DNA (2199bp) protein (733aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZID7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15606.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_2867_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14572..14880
DNA (309bp) protein (103aa)
atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) (EC:3.6.3.14)
ATP synthase H subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D206_9EURY
ATP synthase H subunit {ECO:0000313|EMBL:ELZ28893.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
L3_128_000G1_scaffold_2867_13
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14920..16953
DNA (2034bp) protein (678aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ADF5_9CLOT
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_128_000G1_scaffold_2867_14
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16956..17426
DNA (471bp) protein (157aa)
ATP synthase subunit C. (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1F8_9CLOT
ATP synthase subunit C {ECO:0000313|EMBL:EEG73972.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Displaying 14 items

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