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L3_128_000G1_scaffold_1298

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_1298_1
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..867)
DNA (867bp) protein (289aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7ILX6_DESMD
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AFQ42585.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L3_128_000G1_scaffold_1298_2
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(885..1676)
DNA (792bp) protein (264aa)
ABC transporter related n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W605_DESAS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV61460.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
L3_128_000G1_scaffold_1298_3
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1669..2562)
DNA (894bp) protein (298aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XXB0_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EHQ91116.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L3_128_000G1_scaffold_1298_4
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2578..3465)
DNA (888bp) protein (296aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XXB1_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EHQ91117.1}; Flags: Precursor;; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
binding-protein-dependent transport system inner membrane protein
L3_128_000G1_scaffold_1298_5
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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3792..5777
DNA (1986bp) protein (662aa)
Sigma-54 interaction domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JM28_FUSVA
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EES63873.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_128_000G1_scaffold_1298_6
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5937..7160
DNA (1224bp) protein (408aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2R8A0_9ENTE
Methionine gamma-lyase {ECO:0000313|EMBL:EOH76821.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
L3_128_000G1_scaffold_1298_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7287..8669
DNA (1383bp) protein (461aa)
Na+/H+ antiporter family protein n=2 Tax=Oscillibacter RepID=U2QID9_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:ERK66933.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Na+/H+ antiporter
L3_128_000G1_scaffold_1298_8
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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8804..9991
DNA (1188bp) protein (396aa)
Methionine gamma-lyase {ECO:0000313|EMBL:KDE74331.1}; EC=4.4.1.11 {ECO:0000313|EMBL:KDE74331.1};; TaxID=1441736 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum BFTR-2.;"
Methionine gamma-lyase n=1 Tax=Fusobacterium nucleatum CTI-2 RepID=U7T804_FUSNU
methionine gamma-lyase
L3_128_000G1_scaffold_1298_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10154..10918)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6ESL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99801.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
MerR family transcriptional regulator
L3_128_000G1_scaffold_1298_10
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11236..12558)
DNA (1323bp) protein (441aa)
Putative dipeptidase {ECO:0000313|EMBL:EEG88676.1}; EC=3.4.13.- {ECO:0000313|EMBL:EEG88676.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Putative dipeptidase n=2 Tax=Coprococcus RepID=C0BC75_9FIRM
dipeptidase PepV
L3_128_000G1_scaffold_1298_11
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12613..13881)
DNA (1269bp) protein (423aa)
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7P3_SPISS
cytosine/purines uracil thiamine allantoin permease
Permease for cytosine/purines uracil thiamine allantoin {ECO:0000313|EMBL:ADK82748.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_000G1_scaffold_1298_12
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(13936..15066)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R7P4_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK82749.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_128_000G1_scaffold_1298_13
Enterococcus avium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(15207..16754)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Enterococcus avium ATCC 14025 RepID=S0KMF1_ENTAV
Uncharacterized protein {ECO:0000313|EMBL:EOT42225.1}; TaxID=1140002 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus avium ATCC 14025.;"
putative CadR family transcriptional regulator
L3_128_000G1_scaffold_1298_14
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(17481..18659)
DNA (1179bp) protein (393aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Fusobacterium nucleatum subsp. animalis 11_3_2 RepID=F7L138_FUSNU
Cystathionine gamma-synthase {ECO:0000313|EMBL:EGN66880.1}; TaxID=457403 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis 11_3_2.;"
L3_128_000G1_scaffold_1298_15
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(18693..20144)
DNA (1452bp) protein (484aa)
Amino acid carrier protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JN49_FUSVA
Amino acid carrier protein {ECO:0000313|EMBL:EES62504.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
cysteine permease
L3_128_000G1_scaffold_1298_16
unknown

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20385..21197
DNA (813bp) protein (271aa)
Predicted transcriptional regulators n=2 Tax=Clostridiales RepID=D4MY46_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL37541.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_128_000G1_scaffold_1298_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21651..21905)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75636.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_128_000G1_scaffold_1298_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22369..23295)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26470.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF1266).
L3_128_000G1_scaffold_1298_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23311..24300)
DNA (990bp) protein (330aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=F7K8L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41108.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Protein of unknown function (DUF3137).
L3_128_000G1_scaffold_1298_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24340..25080)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26472.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_128_000G1_scaffold_1298_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25555..26421)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WQY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89942.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_128_000G1_scaffold_1298_22
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(26817..27560)
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein BN453_00834 n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A9J0_9FIRM
Probable transcriptional regulatory protein BN453_00834 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
conserved hypothetical protein TIGR01033
L3_128_000G1_scaffold_1298_23
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(27630..28280)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PZU0_9FIRM
Uncharacterized protein YigZ family {ECO:0000313|EMBL:CCX41075.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L3_128_000G1_scaffold_1298_24
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28303..29541)
DNA (1239bp) protein (413aa)
CobW/P47K family protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZH02_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:CDA28202.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
Putative GTPases (G3E family)
L3_128_000G1_scaffold_1298_25
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(29620..30897)
DNA (1278bp) protein (426aa)
GTPase HflX n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AHA4_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
GTP-binding protein HflX
L3_128_000G1_scaffold_1298_26
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30944..32188)
DNA (1245bp) protein (415aa)
dapL; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZMZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15125.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_1298_27
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32391..32585)
DNA (195bp) protein (65aa)
rRNA methylase putative group 3 n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P7X2_9FIRM
rRNA methylase putative group 3 {ECO:0000313|EMBL:CDC19585.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
rRNA methylases
Displaying 27 items

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