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L3_128_000G1_scaffold_2942

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2942_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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71..1435
DNA (1365bp) protein (455aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2KS72_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EPC05137.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_128_000G1_scaffold_2942_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1625..2833
DNA (1209bp) protein (403aa)
Metallo-beta-lactamase domain protein n=4 Tax=Clostridium RepID=E9SKK7_CLOSY
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI79828.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
putative flavoprotein
L3_128_000G1_scaffold_2942_3
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3052..3960
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZNQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ14204.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_2942_4
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4041..4682)
DNA (642bp) protein (214aa)
Hemolysin III family channel protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZQD9_9CLOT
Hemolysin III family channel protein {ECO:0000313|EMBL:EMZ14599.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
channel protein, hemolysin III family
L3_128_000G1_scaffold_2942_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4906..5217
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BGK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62315.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
PadR family transcriptional regulator
L3_128_000G1_scaffold_2942_6
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5236..5955
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZEY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15532.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
putative membrane protein
L3_128_000G1_scaffold_2942_7
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5948..6469
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZI66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15531.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_128_000G1_scaffold_2942_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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6691..7839
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27648.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
conserved membrane protein of unknown function
L3_128_000G1_scaffold_2942_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7989..8624
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=8 Tax=Clostridium RepID=G5I5P0_9CLOT
L3_128_000G1_scaffold_2942_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8814..10766
DNA (1953bp) protein (651aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DBD1_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI78757.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
diguanylate cyclase
L3_128_000G1_scaffold_2942_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10894..11754
DNA (861bp) protein (287aa)
Nitroreductase family protein n=6 Tax=Clostridium difficile RepID=D5Q5B1_CLODI
Nitroreductase-family protein {ECO:0000313|EMBL:CCK89907.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
nitroreductase-family protein
L3_128_000G1_scaffold_2942_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11953..12876
DNA (924bp) protein (308aa)
Recombinase n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PI90_9CLOT
Recombinase {ECO:0000313|EMBL:CDF24771.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_128_000G1_scaffold_2942_13
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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12869..13930
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MRT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73361.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L3_128_000G1_scaffold_2942_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13947..15533
DNA (1587bp) protein (529aa)
Site-specific recombinases, DNA invertase Pin homologs n=2 Tax=Clostridiales RepID=D4JMT9_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK92293.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_128_000G1_scaffold_2942_15
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15502..16941
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R0T9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44602.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_128_000G1_scaffold_2942_16
unknown

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16965..17096
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 16 items

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