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L3_128_000G1_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_231_1
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..1271
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IR17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53112.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_128_000G1_scaffold_231_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

1277..2410
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BDQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA62348.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Uncharacterized protein involved in tellurite resistance
L3_128_000G1_scaffold_231_3
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2454..3035
DNA (582bp) protein (194aa)
Bacterial stress protein n=2 Tax=Lachnoanaerobaculum saburreum RepID=E6LKK1_9FIRM
Tellurium resistance protein TerD {ECO:0000313|EMBL:EIC96403.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
L3_128_000G1_scaffold_231_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3052..3633
DNA (582bp) protein (194aa)
Tellurium resistance protein TerD n=1 Tax=Dorea sp. 5-2 RepID=R9NDD7_9FIRM
Tellurium resistance protein TerD {ECO:0000313|EMBL:EOS81143.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
stress protein
L3_128_000G1_scaffold_231_5
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3649..4236
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J498_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT23440.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
L3_128_000G1_scaffold_231_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4313..6958
DNA (2646bp) protein (882aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VS71_9CLOT
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EOQ35610.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
plasma-membrane calcium-translocating P-type ATPase
L3_128_000G1_scaffold_231_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7016..7774
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35611.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted hydrolases of the HAD superfamily
L3_128_000G1_scaffold_231_8
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7970..9538
DNA (1569bp) protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T4K0_9FIRM
Signal transduction histidine kinase regulating citrate/malate metabolism
L3_128_000G1_scaffold_231_9
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9551..10243
DNA (693bp) protein (231aa)
Transcriptional regulatory protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC60_9FIRM
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Response regulator of citrate/malate metabolism
L3_128_000G1_scaffold_231_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10244..11143
DNA (900bp) protein (300aa)
Transcriptional regulator LysR family n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKH4_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC68341.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
regulatory protein LysR
L3_128_000G1_scaffold_231_11
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11290..12819
DNA (1530bp) protein (510aa)
Putative sugar ABC transporter, ATP binding protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XK14_9FIRM
Putative sugar ABC transporter, ATP binding protein {ECO:0000313|EMBL:ESL02514.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
ribose ABC transporter ATP-binding protein
L3_128_000G1_scaffold_231_12
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12816..13808
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TF44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68339.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
rbsC; ribose ABC transporter
L3_128_000G1_scaffold_231_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13838..14848
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T4J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68338.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
periplasmic binding protein/LacI transcriptional regulator
L3_128_000G1_scaffold_231_14
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14865..15527
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68337.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L3_128_000G1_scaffold_231_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15755..16891
DNA (1137bp) protein (379aa)
Putative FMN-dependent NADH-azoreductase n=1 Tax=Clostridium sp. D5 RepID=F0Z4T9_9CLOT
Putative FMN-dependent NADH-azoreductase {ECO:0000313|EMBL:EGB90821.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_128_000G1_scaffold_231_16
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16904..17602
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CSI8_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47261.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
integral membrane protein
L3_128_000G1_scaffold_231_17
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17621..17974
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6F6D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36276.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ArsC family protein
L3_128_000G1_scaffold_231_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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comp(18014..18484)
DNA (471bp) protein (157aa)
glyoxalase/bleomycin resistance protein/dioxygenase id=1240985 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_13_Chloroflexi_51_36_curated
L3_128_000G1_scaffold_231_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18504..19541)
DNA (1038bp) protein (346aa)
Chlorophyll synthesis pathway, bchC n=2 Tax=Clostridiales RepID=H1CAC8_9FIRM
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:ERI76205.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
chlorophyll synthesis pathway protein BchC
L3_128_000G1_scaffold_231_20
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(19627..21051)
DNA (1425bp) protein (475aa)
Putative sigma54 specific transcriptional regulator n=1 Tax=Clostridium sp. CAG:505 RepID=R7B6K1_9CLOT
Putative sigma54 specific transcriptional regulator {ECO:0000313|EMBL:CDC26360.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
putative sigma-54 specific transcriptional regulator
L3_128_000G1_scaffold_231_21
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21233..21805
DNA (573bp) protein (191aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
2-oxoacid:acceptor oxidoreductase gamma subunit pyruvate/2-ketoisovalerate family n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z3A9_9FIRM
2-oxoacid:acceptor oxidoreductase gamma subunit pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:CDA28491.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
L3_128_000G1_scaffold_231_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21805..22107
DNA (303bp) protein (101aa)
2-oxoacid:acceptor oxidoreductase delta subunit pyruvate/2-ketoisovalerate family n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBP1_9CLOT
2-oxoacid:acceptor oxidoreductase delta subunit pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:CDD75360.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_128_000G1_scaffold_231_23
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22108..23289
DNA (1182bp) protein (394aa)
porA; pyruvate synthase subunit PorA (EC:1.2.7.1)
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein n=2 Tax=Dorea formicigenerans RepID=B0G204_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ34787.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_128_000G1_scaffold_231_24
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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23305..24237
DNA (933bp) protein (311aa)
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, beta subunit n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MC26_9FIRM
Pyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EOS68363.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L3_128_000G1_scaffold_231_25
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24522..26510
DNA (1989bp) protein (663aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium sp. CAG:505 RepID=R7ARW2_9CLOT
L3_128_000G1_scaffold_231_26
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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26512..27279
DNA (768bp) protein (256aa)
Hydrolase TatD family n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AA85_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CCX39593.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
TatD family hydrolase
L3_128_000G1_scaffold_231_27
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27570..28547
DNA (978bp) protein (326aa)
G5 domain protein n=2 Tax=Firmicutes RepID=R6QVA4_9FIRM
G5 domain protein {ECO:0000313|EMBL:CDD61202.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_128_000G1_scaffold_231_28
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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28656..29717
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5A9B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39815.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
stage II sporulation protein P
L3_128_000G1_scaffold_231_29
unknown

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comp(29697..29954)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_128_000G1_scaffold_231_30
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30767..32644
DNA (1878bp) protein (626aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. ASF356 RepID=N1ZK53_9CLOT
ATP-dependent metalloprotease FtsH
Displaying items 1-30 of 87 in total

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