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L3_128_000G1_scaffold_3047

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_3047_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1179)
DNA (1179bp) protein (393aa)
Mg chelatase subunit ChlI n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7R9_9CLOT
Mg chelatase subunit ChlI {ECO:0000313|EMBL:CDD61117.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Mg chelatase subunit ChlI
L3_128_000G1_scaffold_3047_2
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1414..2745
DNA (1332bp) protein (444aa)
DNA protecting protein DprA n=1 Tax=Clostridium sp. ASF356 RepID=N1ZEF9_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:EMZ15382.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
DNA protecting protein DprA
L3_128_000G1_scaffold_3047_3
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2772..4862
DNA (2091bp) protein (697aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
DNA topoisomerase 1 n=2 Tax=Firmicutes RepID=R7B7E7_9CLOT
DNA topoisomerase I, bacterial
L3_128_000G1_scaffold_3047_4
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5029..5748
DNA (720bp) protein (240aa)
30S ribosomal protein S2 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZNS7_9CLOT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
rpsB; 30S ribosomal protein S2
L3_128_000G1_scaffold_3047_5
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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5852..6787
DNA (936bp) protein (312aa)
Elongation factor Ts n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AGR2_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
translation elongation factor Ts (EF-Ts)
L3_128_000G1_scaffold_3047_6
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6963..7673
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Uridylate kinase n=1 Tax=Clostridium sp. ASF356 RepID=N1ZEG4_9CLOT
uridylate kinase
L3_128_000G1_scaffold_3047_7
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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7711..8265
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AJP1_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
ribosome recycling factor
L3_128_000G1_scaffold_3047_8
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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8340..9092
DNA (753bp) protein (251aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Firmicutes RepID=R6R2P1_9FIRM
L3_128_000G1_scaffold_3047_9
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9034..9921
DNA (888bp) protein (296aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Clostridium sp. ASF356 RepID=N1ZNT3_9CLOT
L3_128_000G1_scaffold_3047_10
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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9941..11092
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PYE6_9FIRM
L3_128_000G1_scaffold_3047_11
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11113..12213
DNA (1101bp) protein (367aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
RIP metalloprotease RseP n=2 Tax=Firmicutes RepID=R6Q6H4_9FIRM
membrane-associated zinc metalloprotease
L3_128_000G1_scaffold_3047_12
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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12267..13292
DNA (1026bp) protein (342aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AJN8_9FIRM
L3_128_000G1_scaffold_3047_13
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13309..16602
DNA (3294bp) protein (1098aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
polC; DNA polymerase III PolC (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Clostridium sp. ASF356 RepID=N1ZSV2_9CLOT
Displaying 13 items

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