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L3_128_007G1_scaffold_298

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_007G1_scaffold_298_1
unknown

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756..932
DNA (177bp) protein (59aa)

This feature has no annotations

L3_128_007G1_scaffold_298_2
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(901..1485)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDH00609.1}; TaxID=1398200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. feltiae Moldova.;"
Protein of unknown function (DUF2726)
L3_128_007G1_scaffold_298_3
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1752..2435
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AFI56310.1}; TaxID=552 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia amylovora (Fire blight bacteria).;"
hypothetical protein
L3_128_007G1_scaffold_298_4
Erwinia amylovora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2480..2839
DNA (360bp) protein (120aa)
Putative 60 kDa chaperonin n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AFI56311.1}; TaxID=552 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia amylovora (Fire blight bacteria).;"
molecular chaperone
L3_128_007G1_scaffold_298_5
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3024..3263
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WNN8_PANSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU73023.1}; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
L3_128_007G1_scaffold_298_6
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3370..4392)
DNA (1023bp) protein (341aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Pantoea sp. GM01 RepID=J2LLP2_9ENTR
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:EJL93130.1}; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
UmuC
L3_128_007G1_scaffold_298_7
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4457..5659)
DNA (1203bp) protein (401aa)
DNA polymerase V subunit UmuC {ECO:0000313|EMBL:KKB02739.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KKB02739.1};; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
DNA polymerase V subunit UmuC (EC:2.7.7.7)
DNA polymerase V subunit UmuC n=8 Tax=Salmonella enterica I RepID=V7IJ59_SALET
L3_128_007G1_scaffold_298_8
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5695..6135)
DNA (441bp) protein (147aa)
DNA polymerase subunit V n=8 Tax=Salmonella enterica I RepID=N0Z1A1_SALET
protein impA'
UmuDC operon protein-like protein {ECO:0000313|EMBL:ESF55516.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
L3_128_007G1_scaffold_298_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6329..7228)
DNA (900bp) protein (300aa)
LysR-family transcriptional regulator n=8 Tax=Salmonella enterica I RepID=N0YV28_SALET
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ESF55515.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
L3_128_007G1_scaffold_298_10
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7327..7854
DNA (528bp) protein (176aa)
N-acetyltransferase n=7 Tax=Salmonella enterica I RepID=S5HZF5_SALET
phosphinothricin acetyltransferase
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:AIQ99910.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergoviae (Enterobacter gergoviae).;"
L3_128_007G1_scaffold_298_11
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7851..9083
DNA (1233bp) protein (411aa)
MFS transporter n=6 Tax=Salmonella enterica I RepID=S5HT05_SALET
MFS transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETA85305.1}; TaxID=1192560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cubana str. 76814.;"
L3_128_007G1_scaffold_298_12
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9132..9467
DNA (336bp) protein (112aa)
ArsR family transcriptional regulator n=8 Tax=Salmonella enterica I RepID=N0YZZ9_SALET
ArsR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ESF55513.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
L3_128_007G1_scaffold_298_13
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9464..10186
DNA (723bp) protein (241aa)
Arsenical resistance protein ArsH n=4 Tax=Salmonella enterica I RepID=N0Z0Q4_SALET
NADPH-dependent FMN reductase
Arsenical resistance protein ArsH {ECO:0000313|EMBL:ETA85307.1}; TaxID=1192560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cubana str. 76814.;"
L3_128_007G1_scaffold_298_14
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10243..10671)
DNA (429bp) protein (143aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1192560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cubana str. 76814.;"
PREDICTED: arsenate reductase-like n=8 Tax=Salmonella enterica I RepID=N0Z196_SALET
arsenate reductase
L3_128_007G1_scaffold_298_15
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10721..12004)
DNA (1284bp) protein (428aa)
Arsenical pump membrane protein n=8 Tax=Salmonella enterica I RepID=N0YV23_SALET
arsenical pump membrane protein
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=1192560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cubana str. 76814.;"
L3_128_007G1_scaffold_298_16
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12101..12370)
DNA (270bp) protein (90aa)
Arsenic resistance transcriptional regulator n=7 Tax=Salmonella enterica I RepID=N0YWD6_SALET
ArsR family transcriptional regulator
DNA-binding transcriptional repressor ArsR {ECO:0000313|EMBL:ESF55509.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
L3_128_007G1_scaffold_298_17
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12633..13091)
DNA (459bp) protein (153aa)
Uncharacterized protein n=8 Tax=Salmonella enterica I RepID=S5HT12_SALET
MerR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGQ75762.1}; TaxID=1271863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050.;"
L3_128_007G1_scaffold_298_18
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13171..15708
DNA (2538bp) protein (846aa)
Heavy metal translocating P-type ATPase n=5 Tax=Salmonella enterica I RepID=N0Z0Q0_SALET
ATPase P {ECO:0000313|EMBL:KJH60905.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
ATPase P
L3_128_007G1_scaffold_298_19
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15790..16089
DNA (300bp) protein (100aa)
Uncharacterized protein n=8 Tax=Salmonella enterica I RepID=S5I0S7_SALET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJM56661.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergoviae (Enterobacter gergoviae).;"
L3_128_007G1_scaffold_298_20
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16219..18345)
DNA (2127bp) protein (709aa)
Site-specific recombinase, phage integrase family n=8 Tax=Salmonella enterica I RepID=N0YV19_SALET
Integrase {ECO:0000313|EMBL:KJH60904.1}; TaxID=553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananas (Erwinia uredovora).;"
integrase
L3_128_007G1_scaffold_298_21
Pluralibacter gergoviae, Pluralibacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18345..19322)
DNA (978bp) protein (326aa)
Tyrosine recombinase xerC n=2 Tax=Salmonella senftenberg RepID=V1LLM2_SALSE
integrase
Integrase {ECO:0000313|EMBL:AIQ99900.1}; TaxID=61647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pluralibacter.;" source="Pluralibacter gergoviae (Enterobacter gergoviae).;"
L3_128_007G1_scaffold_298_22
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19405..19632)
DNA (228bp) protein (76aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Pantoea sp. GM01 RepID=J2LLP2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KGT86794.1}; TaxID=69218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus.;"
umuC7; DNA polymerase V subunit UmuC
L3_128_007G1_scaffold_298_23
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19634..20074)
DNA (441bp) protein (147aa)
UmuDC operon protein-like protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM5_9ENTR
protein impA'
UmuDC operon protein-like protein {ECO:0000313|EMBL:ESF55516.1}; TaxID=930772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC; 43845.;"
L3_128_007G1_scaffold_298_24
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21115..21651
DNA (537bp) protein (179aa)
Single-stranded DNA-binding protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM3_9ENTR
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=642227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella morbirosei.;"
ssb; ssDNA-binding protein
L3_128_007G1_scaffold_298_25
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21800..22342
DNA (543bp) protein (181aa)
Plasmid SOS inhibition protein B n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM2_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM76669.1}; TaxID=1443113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica LC20.;"
L3_128_007G1_scaffold_298_26
unknown

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22339..22740
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) n=1 Tax=Pantoea sp. Sc1 RepID=H8DUM1_9ENTR
L3_128_007G1_scaffold_298_27
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23246..23368
DNA (123bp) protein (41aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=990925 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPX.;"
C-5 cytosine-specific DNA methylase family protein n=20 Tax=Escherichia coli RepID=M8KRE9_ECOLX
modification methylase EcoRII
L3_128_007G1_scaffold_298_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23383..23529)
DNA (147bp) protein (49aa)
Insertion element IS1 4 protein InsB n=9 Tax=Enterobacteriaceae RepID=INSB4_ECOLI
Transposase
Putative transposase {ECO:0000313|EMBL:KDU51369.1}; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
Displaying 28 items

View Taxonomy