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L3_128_015G1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 726 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_015G1_scaffold_4_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..541
DNA (540bp) protein (180aa)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium perfringens RepID=B1RJI2_CLOPF
capsular polysaccharide synthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT25887.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_015G1_scaffold_4_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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562..2985
DNA (2424bp) protein (808aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80330.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3115..4767
DNA (1653bp) protein (551aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB6_CLOPF
cell wall binding repeat-containing protein/zinc carboxypeptidase
Cell wall binding repeat protein/zinc carboxypeptidase family {ECO:0000313|EMBL:EDT22325.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_015G1_scaffold_4_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5019..6638
DNA (1620bp) protein (540aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT96_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17868.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
cell wall binding repeat-containing protein
L3_128_015G1_scaffold_4_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6892..8256
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMR2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80332.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8461..10329
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC0_CLOPF
Transcriptional regulator, MarR family/choline/ethanolamine kinase {ECO:0000313|EMBL:EDT14534.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
licA; choline kinase
L3_128_015G1_scaffold_4_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10355..11323
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC1_CLOPF
licB; lic-1 operon protein
Lic-1 operon protein {ECO:0000313|EMBL:EIA17870.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_015G1_scaffold_4_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11470..12153
DNA (684bp) protein (228aa)
Nucleotidyl transferase family protein n=2 Tax=Clostridium perfringens RepID=Q0TTH7_CLOP1
licC; lic-1 operon protein
Probable lic-1 operon protein {ECO:0000313|EMBL:BAB80335.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12272..13504)
DNA (1233bp) protein (411aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLR4_CLOPF
Cell wall binding repeat protein {ECO:0000313|EMBL:EDS79265.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
cell wall binding repeat-containing protein
L3_128_015G1_scaffold_4_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13623..14642)
DNA (1020bp) protein (340aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTH5_CLOP1
transcriptional regulator
Probable PBP5 synthesis regulator protein {ECO:0000313|EMBL:BAB80337.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14920..16194)
DNA (1275bp) protein (425aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJJ0_CLOPF
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDT25878.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
brnQ; branched-chain amino acid transport system II carrier protein
L3_128_015G1_scaffold_4_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16947..17945
DNA (999bp) protein (333aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CT73_CLOPF
L3_128_015G1_scaffold_4_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18453..19109
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLR0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79268.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_128_015G1_scaffold_4_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19192..20304
DNA (1113bp) protein (371aa)
Putative arylsulfatase regulator n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJJ3_CLOPF
Putative arylsulfatase regulator {ECO:0000313|EMBL:EDT71467.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
anaerobic sulfatase-maturase
L3_128_015G1_scaffold_4_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20725..21555
DNA (831bp) protein (277aa)
Phosphate ABC transporter, phosphate-binding protein n=2 Tax=Clostridium perfringens RepID=B1BLQ8_CLOPF
Phosphate ABC transporter, phosphate-binding protein {ECO:0000313|EMBL:EDS79266.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
phosphate ABC transporter substrate-binding protein
L3_128_015G1_scaffold_4_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21780..22598
DNA (819bp) protein (273aa)
Phosphate ABC transporter, phosphate-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBU5_CLOPF
Phosphate ABC transporter, phosphate-binding protein {ECO:0000313|EMBL:EDT22293.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pstS; phosphate ABC transporter substrate-binding protein
L3_128_015G1_scaffold_4_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22680..23567
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3Z2_CLOPF
pstC; phosphate ABC transporter permease
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EDT71483.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_128_015G1_scaffold_4_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23570..24394
DNA (825bp) protein (275aa)
Phosphate ABC transporter, permease protein PstA n=4 Tax=Clostridium perfringens RepID=Q0TTG7_CLOP1
pstA; phosphate ABC transporter permease
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EDT14550.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_015G1_scaffold_4_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24412..25173
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein PstB {ECO:0000255|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000255|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000255|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000255|HAMAP-Rule:MF_01702}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Phosphate import ATP-binding protein PstB n=11 Tax=Clostridium perfringens RepID=PSTB_CLOP1
phosphate transporter ATP-binding protein
L3_128_015G1_scaffold_4_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25198..25851
DNA (654bp) protein (218aa)
Phosphate-specific transport system accessory protein PhoU n=6 Tax=Clostridium perfringens RepID=H7CT81_CLOPF
phoU; phosphate transporter PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26011..26706
DNA (696bp) protein (232aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJK0_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT25883.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
DNA-binding response regulator
L3_128_015G1_scaffold_4_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26882..27505)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVB3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86339.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_128_015G1_scaffold_4_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27537..27953)
DNA (417bp) protein (139aa)
Flavodoxin n=2 Tax=Clostridium perfringens RepID=H7CT84_CLOPF
flavodoxin
Flavodoxin {ECO:0000313|EMBL:EIA17886.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_015G1_scaffold_4_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28366..30024)
DNA (1659bp) protein (553aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Glutamine--tRNA ligase n=4 Tax=Clostridium perfringens RepID=SYQ_CLOP1
L3_128_015G1_scaffold_4_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30276..30431)
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT86_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26824.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_128_015G1_scaffold_4_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30586..31674)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMP1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80353.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31770..33191
DNA (1422bp) protein (474aa)
Spore germination protein n=6 Tax=Clostridium perfringens RepID=Q0TTF8_CLOP1
spore germination protein
Spore germination protein KA {ECO:0000313|EMBL:BAB80354.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_128_015G1_scaffold_4_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33166..34290
DNA (1125bp) protein (375aa)
Spore germination protein n=8 Tax=Clostridium perfringens RepID=H7CT89_CLOPF
spore germination protein
Spore germination protein {ECO:0000313|EMBL:EIA17891.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_015G1_scaffold_4_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34491..35624
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNE4_CLOPF
ATPase AAA
AAA domain family protein {ECO:0000313|EMBL:EDT22173.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_015G1_scaffold_4_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35700..36113
DNA (414bp) protein (138aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CT91_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17893.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 726 in total

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