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L3_128_015G1_scaffold_67

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_015G1_scaffold_67_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(143..538)
DNA (396bp) protein (132aa)
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Aspartate 1-decarboxylase n=4 Tax=Staphylococcus epidermidis RepID=C5QBP9_STAEP
L3_128_015G1_scaffold_67_2

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comp(522..1382)
DNA (861bp) protein (287aa)
Pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=23 Tax=Staphylococcus epidermidis RepID=PANC_STAEQ
Pantothenate synthetase {ECO:0000313|EMBL:ETJ21313.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_015G1_scaffold_67_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1375..2166)
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=48 Tax=Staphylococcus epidermidis RepID=PANB_STAEQ
L3_128_015G1_scaffold_67_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2236..3138
DNA (903bp) protein (301aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
2-dehydropantoate 2-reductase n=22 Tax=Staphylococcus epidermidis RepID=Q8CMZ3_STAES
L3_128_015G1_scaffold_67_5

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comp(3536..4240)
DNA (705bp) protein (235aa)
Alpha-acetolactate decarboxylase (EC:4.1.1.5)
Alpha-acetolactate decarboxylase n=47 Tax=Staphylococcus epidermidis RepID=Q5HL33_STAEQ
Acetolactate decarboxylase {ECO:0000313|EMBL:ETJ21310.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_015G1_scaffold_67_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4352..6016)
DNA (1665bp) protein (555aa)
Acetolactate synthase, catabolic (EC:2.2.1.6)
Acetolactate synthase, catabolic {ECO:0000313|EMBL:EFE58935.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFE58935.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Acetolactate synthase, catabolic n=49 Tax=Staphylococcus epidermidis RepID=Q5HL32_STAEQ
L3_128_015G1_scaffold_67_7

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comp(6079..7029)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase n=53 Tax=Staphylococcus epidermidis RepID=LDH_STAEQ
L-lactate dehydrogenase
L-lactate dehydrogenase {ECO:0000313|EMBL:ETJ21308.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_015G1_scaffold_67_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7863..8744)
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=73 Tax=Staphylococcus epidermidis RepID=Q5HL30_STAEQ
LysR family regulatory protein CidR
LysR family transcriptional regulator {ECO:0000313|EMBL:ESV19658.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_128_015G1_scaffold_67_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9288..10739
DNA (1452bp) protein (484aa)
Amino acid transporter n=31 Tax=Staphylococcus epidermidis RepID=Q8CMY8_STAES
amino acid permease family protein
Amino acid permease {ECO:0000313|EMBL:EFE58938.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10867..12204)
DNA (1338bp) protein (446aa)
Aminotransferase, class III n=40 Tax=Staphylococcus epidermidis RepID=C5QBP0_STAEP
aminotransferase
Aminotransferase, class III {ECO:0000313|EMBL:EFE58939.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_11

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12470..12901
DNA (432bp) protein (144aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=C5QBN8_STAEP
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21304.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_015G1_scaffold_67_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13005..13934)
DNA (930bp) protein (310aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=Q8CR16_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58942.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14206..14796
DNA (591bp) protein (197aa)
Cell wall surface anchor family protein n=2 Tax=Staphylococcus epidermidis RepID=H3W261_STAEP
hypothetical protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:EFE58943.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14791..14979)
DNA (189bp) protein (63aa)
transposase n=1 Tax=Staphylococcus epidermidis RepID=UPI000357CFA7
truncated transposase
IS1272, transposase {ECO:0000313|EMBL:EFE58944.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15589..16950
DNA (1362bp) protein (454aa)
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFE58945.1}; EC=1.11.1.1 {ECO:0000313|EMBL:EFE58945.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NADH peroxidase n=1 Tax=Staphylococcus epidermidis VCU144 RepID=F3SVP4_STAEP
hypothetical protein
L3_128_015G1_scaffold_67_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17255..18145
DNA (891bp) protein (297aa)
fda; fructose-bisphosphate aldolase class 1 (EC:4.1.2.13)
Fructose-bisphosphate aldolase class 1 {ECO:0000256|HAMAP-Rule:MF_00729}; EC=4.1.2.13 {ECO:0000256|HAMAP-Rule:MF_00729};; Fructose-bisphosphate aldolase class I {ECO:0000256|HAMAP-Rule:MF_00729}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Fructose-bisphosphate aldolase class 1 n=48 Tax=Staphylococcus epidermidis RepID=ALF1_STAES
L3_128_015G1_scaffold_67_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18278..19201)
DNA (924bp) protein (308aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CR13_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58947.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19596..21125)
DNA (1530bp) protein (510aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Malate:quinone oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase 4 n=60 Tax=Staphylococcus epidermidis RepID=MQO4_STAES
L3_128_015G1_scaffold_67_19
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(21304..22122)
DNA (819bp) protein (273aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Putative pyruvate, phosphate dikinase regulatory protein 2 n=51 Tax=Staphylococcus epidermidis RepID=PDRP2_STAEQ
kinase/pyrophosphorylase family protein
L3_128_015G1_scaffold_67_20
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22124..24751)
DNA (2628bp) protein (876aa)
Pyruvate,phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Staphylococcus epidermidis RepID=J0IX12_STAEP
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ETJ14103.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_128_015G1_scaffold_67_21
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25099..26694)
DNA (1596bp) protein (532aa)
Acetate-CoA ligase n=43 Tax=Staphylococcus epidermidis RepID=Q8CR10_STAES
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Putative Butyrate-CoA ligase {ECO:0000313|EMBL:ETJ14102.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_128_015G1_scaffold_67_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27031..27477)
DNA (447bp) protein (149aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q8CR09_STAES
hypothetical protein
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EFE58952.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27505..27723)
DNA (219bp) protein (73aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q8CR08_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58953.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_015G1_scaffold_67_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28170..29345)
DNA (1176bp) protein (392aa)
Amidohydrolase family protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HL12_STAEQ
aminoacylase
Amidohydrolase family protein {ECO:0000313|EMBL:AAW52968.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_015G1_scaffold_67_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29667..31385)
DNA (1719bp) protein (573aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
betA; choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase n=79 Tax=Staphylococcus epidermidis RepID=BETA_STAES
L3_128_015G1_scaffold_67_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31545..33035)
DNA (1491bp) protein (497aa)
Betaine aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000256|SAAS:SAAS00007649}; EC=1.2.1.8 {ECO:0000256|SAAS:SAAS00007649};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Betaine aldehyde dehydrogenase n=42 Tax=Staphylococcus epidermidis RepID=Q5HL10_STAEQ
L3_128_015G1_scaffold_67_27

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33504..34085
DNA (582bp) protein (194aa)
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=Q8CR07_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ21168.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 27 items

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