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L3_128_020G1_scaffold_104

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_020G1_scaffold_104_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..1226
DNA (1224bp) protein (408aa)
Uncharacterized protein n=11 Tax=Staphylococcus epidermidis RepID=Q5HRJ3_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53613.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_020G1_scaffold_104_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1316..2011)
DNA (696bp) protein (232aa)
Hydrolase, haloacid dehalogenase-like family n=18 Tax=Staphylococcus epidermidis RepID=Q5HRJ4_STAEQ
HAD superfamily hydrolase
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:AAW53612.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_020G1_scaffold_104_3

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comp(2380..4074)
DNA (1695bp) protein (565aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=40 Tax=Staphylococcus epidermidis RepID=C5Q6N2_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ20169.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Poly(glycerophosphate) glycerophosphotransferase family protein
L3_128_020G1_scaffold_104_4

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comp(4091..5122)
DNA (1032bp) protein (344aa)
Xylitol dehydrogenase n=47 Tax=Staphylococcus RepID=Q8CQ76_STAES
xylitol dehydrogenase
Ribitol-5-phosphate 2-dehydrogenase {ECO:0000313|EMBL:ETJ20168.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_020G1_scaffold_104_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5115..5831)
DNA (717bp) protein (239aa)
ribitol-5-phosphate cytidylyltransferase (EC:2.7.7.40)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=45 Tax=Staphylococcus epidermidis RepID=ISPD_STAES
L3_128_020G1_scaffold_104_6

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comp(6101..7177)
DNA (1077bp) protein (359aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Probable branched-chain-amino-acid aminotransferase n=40 Tax=Staphylococcus epidermidis RepID=ILVE_STAES
Putative branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:ETJ20166.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_020G1_scaffold_104_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7634..8170)
DNA (537bp) protein (179aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Staphylococcus epidermidis VCU071 RepID=H0DPP1_STAEP
UDP-glucose 4-epimerase
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFE58367.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_020G1_scaffold_104_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8293..8589)
DNA (297bp) protein (99aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0Y6Y0_STAEP
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFE58367.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_020G1_scaffold_104_9

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8848..9057
DNA (210bp) protein (70aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HRK0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ20164.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_020G1_scaffold_104_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9145..10095)
DNA (951bp) protein (317aa)
Ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase/mu-crystallin family protein n=31 Tax=Staphylococcus epidermidis RepID=Q5HRK1_STAEQ
Ornithine cyclodeaminase/mu-crystallin family protein {ECO:0000313|EMBL:AAW53597.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_020G1_scaffold_104_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10347..10856)
DNA (510bp) protein (170aa)
Acetyltransferase, GNAT family n=49 Tax=Staphylococcus RepID=Q5HRK2_STAEQ
Acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE58364.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_020G1_scaffold_104_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11412..12599
DNA (1188bp) protein (396aa)
N-acetyl-L,L-diaminopimelate deacetylase homolog (EC:3.5.1.18)
Amidohydrolase n=29 Tax=Staphylococcus RepID=C5Q6M4_STAEP
Amidohydrolase {ECO:0000313|EMBL:EES36972.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L3_128_020G1_scaffold_104_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12725..13960)
DNA (1236bp) protein (412aa)
Elongation factor Tu n=17 Tax=Staphylococcus RepID=C5QPQ2_9STAP
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Translation elongation factor Tu
L3_128_020G1_scaffold_104_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14128..14514)
DNA (387bp) protein (129aa)
Elongation factor G n=2 Tax=Staphylococcus hominis RepID=E5CLJ5_STAHO
Translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying 14 items

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