ggKbase home page

L3_128_020G1_scaffold_123

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_020G1_scaffold_123_1

Not on your lists

1..354
DNA (354bp) protein (118aa)
Pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha n=63 Tax=Staphylococcus epidermidis RepID=ODPA_STAEQ
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:ETJ17942.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_020G1_scaffold_123_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

358..1335
DNA (978bp) protein (326aa)
Pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta; EC=1.2.4.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Pyruvate dehydrogenase E1 component subunit beta n=65 Tax=Staphylococcus epidermidis RepID=ODPB_STAEQ
L3_128_020G1_scaffold_123_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1466..2767
DNA (1302bp) protein (434aa)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; EC=2.3.1.12;; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; E2; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex n=45 Tax=Staphylococcus epidermidis RepID=ODP2_STAEQ
L3_128_020G1_scaffold_123_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2772..4178
DNA (1407bp) protein (469aa)
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Dihydrolipoyl dehydrogenase n=3 Tax=Staphylococcus epidermidis RepID=J0H2D9_STAEP
L3_128_020G1_scaffold_123_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4480..4758
DNA (279bp) protein (93aa)
UPF0223 protein SERP0684 n=46 Tax=Staphylococcus epidermidis RepID=Y684_STAEQ
hypothetical protein
UPF0223 protein SE_0795 {ECO:0000255|HAMAP-Rule:MF_01041}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L3_128_020G1_scaffold_123_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4897..5436
DNA (540bp) protein (180aa)
Transcriptional regulator, Cro/CI family n=51 Tax=Staphylococcus epidermidis RepID=Q5HQ71_STAEQ
hypothetical protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFE59260.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_020G1_scaffold_123_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5448..6542
DNA (1095bp) protein (365aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000255|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000255|HAMAP-Rule:MF_01726};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Spermidine/putrescine import ATP-binding protein PotA n=26 Tax=Staphylococcus epidermidis RepID=POTA_STAEQ
potA; spermidine/putrescine ABC transporter ATP-binding protein
L3_128_020G1_scaffold_123_8

Not on your lists

6535..7338
DNA (804bp) protein (268aa)
PotB protein n=33 Tax=Staphylococcus epidermidis RepID=Q8CPM9_STAES
potB protein
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ17949.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_020G1_scaffold_123_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7413..8156
DNA (744bp) protein (248aa)
Spermidine/putrescine ABC transporter, permease protein PotC n=38 Tax=Staphylococcus epidermidis RepID=Q5HQ68_STAEQ
potC; spermidine/putrescine ABC transporter permease PotC
Spermidine/putrescine ABC transporter, permease protein PotC {ECO:0000313|EMBL:AAW54067.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_020G1_scaffold_123_10

Not on your lists

8153..9226
DNA (1074bp) protein (358aa)
PotD protein n=29 Tax=Staphylococcus epidermidis RepID=Q8CPM7_STAES
potD protein
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein {ECO:0000313|EMBL:ETJ17951.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_020G1_scaffold_123_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9295..9627
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM001 RepID=J0RD50_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59255.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Displaying 11 items

View Taxonomy