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L3_128_043G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_26_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(165..2771)
DNA (2607bp) protein (869aa)
Bacterial membrane protein YfhO n=4 Tax=Staphylococcus aureus RepID=H0DCC7_STAAU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD30318.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_128_043G1_scaffold_26_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3172..4056
DNA (885bp) protein (295aa)
Ribosome biogenesis GTPase A n=16 Tax=Staphylococcus aureus RepID=Q6G9X0_STAAS
rbgA; ribosomal biogenesis GTPase
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1155084 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus 71193.;"
L3_128_043G1_scaffold_26_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4040..4807
DNA (768bp) protein (256aa)
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Ribonuclease HII n=14 Tax=Staphylococcus aureus RepID=RNH2_STAAS
rnhB; ribonuclease HII
L3_128_043G1_scaffold_26_4
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4916..6082
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase (ADP-forming) beta chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; Short=SCS-beta {ECO:0000255|HAMAP-Rule:MF_00558};; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=4 Tax=Staphylococcus aureus RepID=H0DCD0_STAAU
L3_128_043G1_scaffold_26_5
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6104..7012
DNA (909bp) protein (303aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=3 Tax=Staphylococcus aureus RepID=H4A491_STAAU
L3_128_043G1_scaffold_26_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7239..8357
DNA (1119bp) protein (373aa)
lytN; Probable cell wall hydrolase lytN (EC:3.-.-.-)
Probable cell wall hydrolase LytN; EC=3.-.-.-;; Flags: Precursor;; TaxID=158879 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain N315).;"
Probable cell wall hydrolase LytN n=2 Tax=Staphylococcus aureus subsp. aureus RepID=LYTN_STAAS
L3_128_043G1_scaffold_26_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8385..9629
DNA (1245bp) protein (415aa)
Methicillin resistance-related protein FmhC n=67 Tax=Staphylococcus aureus RepID=A6QGE8_STAAE
fmhC; FemAB family peptidoglycan biosynthesis protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD30324.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_128_043G1_scaffold_26_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9802..10674
DNA (873bp) protein (291aa)
Uncharacterized protein n=85 Tax=Staphylococcus aureus RepID=A6QGE9_STAAE
DNA processing protein DprA
SMF family protein {ECO:0000313|EMBL:CRC07245.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_26_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10848..12923
DNA (2076bp) protein (692aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
DNA topoisomerase (EC:5.99.1.2)
DNA topoisomerase 1 n=248 Tax=Staphylococcus RepID=A5ISD4_STAA9
L3_128_043G1_scaffold_26_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13079..14386
DNA (1308bp) protein (436aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000255|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000255|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01037}; TaxID=158879 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain N315).;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=351 Tax=Staphylococcus aureus RepID=TRMFO_STAA1
trmFO; tRNA:m(5)U-54 MTase gid
L3_128_043G1_scaffold_26_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14769..15665
DNA (897bp) protein (299aa)
Tyrosine recombinase XerC n=14 Tax=Staphylococcus aureus RepID=XERC_STAAS
xerC; tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_26_12
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15662..16207
DNA (546bp) protein (182aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
ATP-dependent protease subunit HslV n=407 Tax=Staphylococcus RepID=HSLV_STAA1
ATP-dependent protease hslV
L3_128_043G1_scaffold_26_13
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16273..17676
DNA (1404bp) protein (468aa)
ATP-dependent protease ATPase subunit HslU n=353 Tax=Staphylococcus aureus RepID=HSLU_STAA2
hslU; ATP-dependent hsl protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000255|HAMAP-Rule:MF_00249}; Unfoldase HslU {ECO:0000255|HAMAP-Rule:MF_00249}; TaxID=426430 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Newman).;"
L3_128_043G1_scaffold_26_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17701..18474
DNA (774bp) protein (258aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=377 Tax=Staphylococcus aureus RepID=CODY_STAA1
codY; GTP-sensing transcriptional pleiotropic repressor CodY
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000255|HAMAP-Rule:MF_00621}; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
L3_128_043G1_scaffold_26_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18816..19583
DNA (768bp) protein (256aa)
30S ribosomal protein S2 n=242 Tax=Staphylococcus aureus RepID=RS2_STAA1
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_043G1_scaffold_26_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19765..20646
DNA (882bp) protein (294aa)
Elongation factor Ts n=166 Tax=Staphylococcus aureus RepID=EFTS_STAA3
tsf; Translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_26_17
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20783..21505
DNA (723bp) protein (241aa)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UMP kinase {ECO:0000255|HAMAP-Rule:MF_01220};; Short=UMPK {ECO:0000255|HAMAP-Rule:MF_01220};; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Uridylate kinase n=413 Tax=Staphylococcus aureus RepID=PYRH_STAA1
pyrH; putative uridylate kinase
L3_128_043G1_scaffold_26_18
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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21524..22078
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=399 Tax=Staphylococcus aureus RepID=RRF_STAA1
ribosome Recycling Factor (RRF)
Ribosome-recycling factor {ECO:0000255|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000255|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000255|HAMAP-Rule:MF_00040}; TaxID=282458 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MRSA252).;"
L3_128_043G1_scaffold_26_19
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22418..23221
DNA (804bp) protein (268aa)
uppS; Di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Isoprenyl transferase n=247 Tax=Staphylococcus aureus RepID=ISPT_STAAM
L3_128_043G1_scaffold_26_20
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23228..24010
DNA (783bp) protein (261aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Phosphatidate cytidylyltransferase n=8 Tax=Staphylococcus aureus RepID=I0JCI8_STAAU
putative phosphatidate cytidylyltransferase
L3_128_043G1_scaffold_26_21
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24222..25508
DNA (1287bp) protein (429aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Putative zinc metalloprotease SACOL1281 n=78 Tax=Staphylococcus aureus RepID=Y1281_STAAC
hypothetical protein
L3_128_043G1_scaffold_26_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25528..27231
DNA (1704bp) protein (568aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
proS; proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase n=10 Tax=Staphylococcus aureus RepID=C5N505_STAA3
L3_128_043G1_scaffold_26_23
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27495..31805
DNA (4311bp) protein (1437aa)
polC; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356, ECO:0000313|EMBL:CKH08755.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
DNA polymerase III polC-type n=7 Tax=Staphylococcus aureus RepID=G8V252_STAAU
L3_128_043G1_scaffold_26_24
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32095..32562
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=165 Tax=Staphylococcus aureus RepID=RIMP_STAA3
protein LMOf2365_1338
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=426430 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Newman).;"
L3_128_043G1_scaffold_26_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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32583..33758
DNA (1176bp) protein (392aa)
Transcription termination-antitermination factor n=73 Tax=Staphylococcus aureus RepID=A6QGG6_STAAE
NusA antitermination factor
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_26_26
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33779..34063
DNA (285bp) protein (95aa)
Uncharacterized protein n=410 Tax=Staphylococcus aureus RepID=A5ISF1_STAA9
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD30345.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_128_043G1_scaffold_26_27
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34060..34377
DNA (318bp) protein (106aa)
LSU ribosomal protein L7AE n=352 Tax=Staphylococcus aureus RepID=A5ISF2_STAA9
putative ribosomal protein
Ribosomal protein L7Ae family protein {ECO:0000313|EMBL:AGY89372.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_128_043G1_scaffold_26_28
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34382..36499
DNA (2118bp) protein (706aa)
Translation initiation factor IF-2 n=267 Tax=Staphylococcus aureus RepID=IF2_STAA1
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_128_043G1_scaffold_26_29
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36843..37235
DNA (393bp) protein (131aa)
Ribosome-binding factor A n=1 Tax=Staphylococcus aureus subsp. aureus M1015 RepID=D6GZP1_STAAU
rbfA; putative ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
L3_128_043G1_scaffold_26_30
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37405..38322
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
tRNA pseudouridine synthase B n=77 Tax=Staphylococcus aureus RepID=TRUB_STAA3
truB; tRNA pseudouridine synthase B
Displaying items 1-30 of 73 in total

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