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L3_128_043G1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_74_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

166..933
DNA (768bp) protein (256aa)
Acetolactate decarboxylase {ECO:0000313|EMBL:ACJ53298.1}; EC=4.1.1.5 {ECO:0000313|EMBL:ACJ53298.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Acetolactate decarboxylase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNE2_BIFLS
alpha-acetolactate decarboxylase
L3_128_043G1_scaffold_74_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1275..1724
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWD1_BIFLJ
hypothetical protein
YwiC-like protein {ECO:0000313|EMBL:KFI71271.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_043G1_scaffold_74_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2053..2343)
DNA (291bp) protein (97aa)
Aldehyde-alcohol dehydrogenase 2 n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2T6_BIFLN
aldehyde-alcohol dehydrogenase
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_128_043G1_scaffold_74_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2450..4693)
DNA (2244bp) protein (748aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWD2_BIFLJ
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
iron-containing alcohol dehydrogenase
L3_128_043G1_scaffold_74_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5208..6401
DNA (1194bp) protein (398aa)
ROK family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWD3_BIFLJ
ROK family protein {ECO:0000313|EMBL:KFI71269.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ROK family protein
L3_128_043G1_scaffold_74_6
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6398..6862
DNA (465bp) protein (155aa)
glycogen debranching enzyme GlgX (EC:3.2.1.-)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Glycogen debranching enzyme GlgX n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DC68_BIFLN
L3_128_043G1_scaffold_74_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6807..8825
DNA (2019bp) protein (673aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
glycogen debranching enzyme GlgX (EC:3.2.1.-)
Glycogen debranching enzyme GlgX n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZJ6_9BIFI
L3_128_043G1_scaffold_74_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8942..9433)
DNA (492bp) protein (164aa)
30S ribosomal protein S9 n=25 Tax=Bacteria RepID=RS9_BIFLD
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_128_043G1_scaffold_74_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9456..9905)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=RL13_BIFLS
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_128_043G1_scaffold_74_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10303..12468)
DNA (2166bp) protein (722aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
4-alpha-glucanotransferase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B6Z8_BIFLN
malQ1; 4-alpha-glucanotransferase
L3_128_043G1_scaffold_74_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12636..13367)
DNA (732bp) protein (244aa)
Leucine rich repeat variant n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNF0_BIFLS
Leucine rich repeat variant {ECO:0000313|EMBL:KFI71264.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
leucine rich repeat variant
L3_128_043G1_scaffold_74_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13375..14016)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AS40_BIFLN
YigZ family protein {ECO:0000313|EMBL:KFI71263.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_043G1_scaffold_74_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14078..15094)
DNA (1017bp) protein (339aa)
Putative 2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KFI71262.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFI71262.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNF2_BIFLS
D-isomer specific 2-hydroxyacid dehydrogenase
L3_128_043G1_scaffold_74_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15168..16511)
DNA (1344bp) protein (448aa)
Bacterial capsule synthesis protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B739_BIFLN
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EIJ32064.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_128_043G1_scaffold_74_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17206..18342)
DNA (1137bp) protein (379aa)
Threonine/homoserine efflux transporter n=14 Tax=Bifidobacterium RepID=B3DPZ3_BIFLD
hypothetical protein
Conserved hypothetical transmembrane protein with duf6 {ECO:0000313|EMBL:AAN25357.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_128_043G1_scaffold_74_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18382..19656
DNA (1275bp) protein (425aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA polymerase IV n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5ND44_9BIFI
putative DNA polymerase
L3_128_043G1_scaffold_74_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19683..20918)
DNA (1236bp) protein (412aa)
Class I and II aminotransferase {ECO:0000313|EMBL:KFI71258.1}; EC=2.6.1.83 {ECO:0000313|EMBL:KFI71258.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aminotransferase, class I and II n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWE5_BIFLJ
class I and II aminotransferase
L3_128_043G1_scaffold_74_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21033..21353)
DNA (321bp) protein (107aa)
Ferredoxin n=17 Tax=Bifidobacterium RepID=B3DPZ0_BIFLD
fdxC; ferredoxin
Ferredoxin {ECO:0000313|EMBL:EEQ55961.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_128_043G1_scaffold_74_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21414..22940)
DNA (1527bp) protein (509aa)
Amino acid permease-associated region n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWE7_BIFLJ
amino acid permease-associated domain-containing protein
Amino acid permease-associated region {ECO:0000313|EMBL:ADH01203.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_043G1_scaffold_74_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23091..24314)
DNA (1224bp) protein (408aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWE8_BIFLJ
UDP-N-acetylmuramate dehydrogenase
L3_128_043G1_scaffold_74_21
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(24525..24692)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=25 Tax=Bifidobacterium RepID=RL33_BIFLO
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
L3_128_043G1_scaffold_74_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25295..25687
DNA (393bp) protein (131aa)
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ED67_BIFLI
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EEQ55957.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
gamma lyase
L3_128_043G1_scaffold_74_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25697..25846
DNA (150bp) protein (50aa)
Cystathionine beta-lyse/cystathionine gamma-synthase n=4 Tax=Bifidobacterium longum RepID=B3DPY4_BIFLD
metC4; cystathionine beta-lyase/cystathionine gamma-synthase
Cystathionine beta-lyases/cystathionine gamma-synthase {ECO:0000313|EMBL:KFI71252.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_043G1_scaffold_74_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26518..26811)
DNA (294bp) protein (98aa)
10 kDa chaperonin n=20 Tax=Bifidobacterium RepID=CH10_BIFLD
co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_128_043G1_scaffold_74_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26984..28423)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZK3_9BIFI
Membrane-associated protein {ECO:0000313|EMBL:KFI71250.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_043G1_scaffold_74_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28504..29169)
DNA (666bp) protein (222aa)
Acetyltransferase {ECO:0000313|EMBL:KFI71249.1}; EC=2.3.1.128 {ECO:0000313|EMBL:KFI71249.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative acetyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MVW5_BIFL1
acetyltransferase
L3_128_043G1_scaffold_74_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29235..29939
DNA (705bp) protein (235aa)
5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Bifidobacterium RepID=E5XZN3_9BIFI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71910.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_128_043G1_scaffold_74_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30140..30325
DNA (186bp) protein (62aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DPX9_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99118.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_128_043G1_scaffold_74_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30505..31131
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G440_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25345.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_128_043G1_scaffold_74_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31226..31426)
DNA (201bp) protein (67aa)
Uncharacterized protein n=18 Tax=Bacteria RepID=B3DPX7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44310.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying items 1-30 of 44 in total

View Taxonomy