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L3_128_043G1_scaffold_100

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_100_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..933
DNA (933bp) protein (311aa)
Perfringolysin O regulator protein n=9 Tax=Staphylococcus epidermidis RepID=D1WIX8_STAEP
Regulatory protein PfoR
Perfringolysin O regulator protein {ECO:0000313|EMBL:AAW53484.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_043G1_scaffold_100_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1448..1831
DNA (384bp) protein (128aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q5HRW3_STAEQ
hypothetical protein
Glyoxalase family protein {ECO:0000313|EMBL:EFE58629.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2002..3204
DNA (1203bp) protein (401aa)
Cobalamin synthesis protein, putative n=42 Tax=Staphylococcus epidermidis RepID=Q5HRW2_STAEQ
COG0523: Putative GTPases (G3E family)
CobW/P47K family protein {ECO:0000313|EMBL:EFE58630.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_4

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4777..6273
DNA (1497bp) protein (499aa)
NADH dehydrogenase subunit 5 n=1 Tax=Staphylococcus epidermidis NIHLM049 RepID=J0ZDU6_STAEP
NADH-Ubiquinone/plastoquinone (complex I), various chains family protein
NADH dehydrogenase subunit 5 {ECO:0000313|EMBL:ETJ21009.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_043G1_scaffold_100_5

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6291..8858
DNA (2568bp) protein (856aa)
UPF0753 protein SEVCU041_0668 n=6 Tax=Staphylococcus epidermidis RepID=H3UGG8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ21008.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog
L3_128_043G1_scaffold_100_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8971..9339
DNA (369bp) protein (123aa)
Uncharacterized protein n=64 Tax=Staphylococcus epidermidis RepID=Q5HRV5_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53500.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_043G1_scaffold_100_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9381..9629)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM049 RepID=J0NZZ3_STAEP
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58635.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9851..10552
DNA (702bp) protein (234aa)
PAP2 family protein n=1 Tax=Staphylococcus epidermidis NIHLM049 RepID=J0FP04_STAEP
PAP2 family protein {ECO:0000313|EMBL:EFE58636.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
PAP2 superfamily protein
L3_128_043G1_scaffold_100_9

Not on your lists

10659..11387
DNA (729bp) protein (243aa)
Uncharacterized protein n=22 Tax=Staphylococcus epidermidis RepID=C5QAC6_STAEP
dienelactone hydrolase family protein
Carboxylesterase family protein {ECO:0000313|EMBL:ETJ21004.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_043G1_scaffold_100_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11402..11644
DNA (243bp) protein (81aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HRV1_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV19191.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_128_043G1_scaffold_100_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11789..13117
DNA (1329bp) protein (443aa)
Transporter n=50 Tax=Staphylococcus epidermidis RepID=Q5HRV0_STAEQ
Sodium-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_043G1_scaffold_100_12

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comp(13296..13835)
DNA (540bp) protein (180aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=C5QAC3_STAEP
hypothetical protein
Pentapeptide repeat protein {ECO:0000313|EMBL:ETJ21001.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_043G1_scaffold_100_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14144..15052
DNA (909bp) protein (303aa)
Pyridoxal-phosphate dependent protein {ECO:0000313|EMBL:EFE58641.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EFE58641.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Cysteine synthase/cystathionine beta-synthase family protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HRU8_STAEQ
cysteine synthase/cystathionine beta-synthase family protein
L3_128_043G1_scaffold_100_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15045..16190
DNA (1146bp) protein (382aa)
Cystathionine gamma-lyase (EC:4.4.1.1)
Trans-sulfuration enzyme family protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HRU7_STAEQ
Trans-sulfuration enzyme family protein {ECO:0000313|EMBL:AAW53516.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_043G1_scaffold_100_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16438..17463
DNA (1026bp) protein (342aa)
Methionine import ATP-binding protein MetN 2 {ECO:0000255|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01719};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Methionine import ATP-binding protein MetN 1 n=45 Tax=Staphylococcus epidermidis RepID=METN1_STAEQ
ABC transporter ATP-binding protein
L3_128_043G1_scaffold_100_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17466..18125
DNA (660bp) protein (220aa)
ABC transporter, permease protein n=74 Tax=Staphylococcus epidermidis RepID=Q5HRU4_STAEQ
Methionine ABC transporter permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AAW53526.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_043G1_scaffold_100_17

Not on your lists

18169..19014
DNA (846bp) protein (282aa)
Lipoprotein n=37 Tax=Staphylococcus epidermidis RepID=Q5HRU3_STAEQ
ABC transporter substrate-binding protein
Lipoprotein {ECO:0000313|EMBL:ETJ18072.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_043G1_scaffold_100_18

Not on your lists

19539..20513
DNA (975bp) protein (325aa)
N-acetylmuramoyl-L-alanine amidase Sle1 n=6 Tax=Staphylococcus epidermidis RepID=H3UGI1_STAEP
N-acetylmuramoyl-L-alanine amidase sle1 {ECO:0000313|EMBL:ETJ18071.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
autolysin (N-acetylmuramoyl-L-alanine amidase
L3_128_043G1_scaffold_100_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20640..22145)
DNA (1506bp) protein (502aa)
Poly(glycerol-phosphate) alpha-glucosyltransferase (EC:2.4.1.52)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFE58647.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFE58647.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Glycosyl transferase, group 1 family protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HRU1_STAEQ
L3_128_043G1_scaffold_100_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22521..22799)
DNA (279bp) protein (93aa)
Uncharacterized protein n=42 Tax=Staphylococcus epidermidis RepID=Q5HRU0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58648.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22987..23373
DNA (387bp) protein (129aa)
MutT/nudix family protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HRT9_STAEQ
MutT domain containing protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFE58649.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23886..24671)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM049 RepID=J0P002_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53540.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_128_043G1_scaffold_100_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24668..25780)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HRT6_STAEQ
yibE/F-like family protein
YibE/F-like protein {ECO:0000313|EMBL:EFE58652.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_24

Not on your lists

comp(25917..26798)
DNA (882bp) protein (294aa)
Transcriptional regulatory protein GltC, putative n=33 Tax=Staphylococcus epidermidis RepID=Q5HRT5_STAEQ
Transcription activator of glutamate synthase operon
Glutamate synthase operon transcriptional regulator {ECO:0000313|EMBL:ETJ18065.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_043G1_scaffold_100_25

Not on your lists

26989..31485
DNA (4497bp) protein (1499aa)
Class II glutamine amidotransferase n=21 Tax=Staphylococcus RepID=C5QAB0_STAEP
glutamine amidotransferases class-II family protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18064.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_043G1_scaffold_100_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31503..32966
DNA (1464bp) protein (488aa)
Glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase subunit beta {ECO:0000313|EMBL:EFE58655.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EFE58655.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Glutamate synthase, small subunit n=48 Tax=Staphylococcus epidermidis RepID=Q5HRT4_STAEQ
L3_128_043G1_scaffold_100_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33199..34020)
DNA (822bp) protein (274aa)
Transcriptional regulator, LysR family n=46 Tax=Staphylococcus RepID=Q5HRT3_STAEQ
LysR-type transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EFE58656.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_128_043G1_scaffold_100_28

Not on your lists

34162..35130
DNA (969bp) protein (323aa)
UPF0324 membrane protein SERP0111 n=46 Tax=Staphylococcus RepID=Y111_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18061.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 28 items

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