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L3_128_043G1_scaffold_116

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_116_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..147
DNA (147bp) protein (49aa)
Truncated transposase n=7 Tax=Staphylococcus aureus subsp. aureus RepID=D0K4W5_STAAD
transposase
Uncharacterized protein {ECO:0000313|EMBL:EES92996.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_043G1_scaffold_116_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(283..1185)
DNA (903bp) protein (301aa)
Conserved virulence factor B n=279 Tax=Staphylococcus aureus RepID=CVFB_STAAB
cvfB; virulence factor B
Strain SA-120 Contig629, whole genome shotgun sequence {ECO:0000313|EMBL:KIT95909.1}; Uncharacterized protein {ECO:0000313|EMBL:CCP89223.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_128_043G1_scaffold_116_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1332..2933
DNA (1602bp) protein (534aa)
ABC transporter, ATP-binding protein n=312 Tax=Staphylococcus aureus RepID=D6SH19_STAAU
ATP-binding ABC transporter protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CEK44366.1}; Uncharacterized ABC transporter ATP-binding protein YkpA {ECO:0000313|EMBL:CEF82391.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_116_4
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3793..4998
DNA (1206bp) protein (402aa)
lysC; Aspartokinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Aspartokinase n=4 Tax=Staphylococcus aureus RepID=H0DCV8_STAAU
L3_128_043G1_scaffold_116_5
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5062..6051
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1155084 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus 71193.;"
Aspartate-semialdehyde dehydrogenase n=255 Tax=Staphylococcus aureus RepID=A5ISS6_STAA9
asd; Aspartate semialdehyde dehydrogenase
L3_128_043G1_scaffold_116_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6053..6940
DNA (888bp) protein (296aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Staphylococcus aureus RepID=H0DCW0_STAAU
dihydrodipicolinate synthase
L3_128_043G1_scaffold_116_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6937..7659
DNA (723bp) protein (241aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
4-hydroxy-tetrahydrodipicolinate reductase n=16 Tax=Staphylococcus aureus RepID=DAPB_STAAS
dapB; dihydrodipicolinate reductase
L3_128_043G1_scaffold_116_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7686..8405
DNA (720bp) protein (240aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01691}; EC=2.3.1.89 {ECO:0000255|HAMAP-Rule:MF_01691};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01691}; Short=THP acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01691};; Short=Tetrahydropicolinate acetylase {ECO:0000255|HAMAP-Rule:MF_01691};; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=363 Tax=Staphylococcus aureus RepID=DAPH_STAA1
L3_128_043G1_scaffold_116_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8548..9699
DNA (1152bp) protein (384aa)
Uncharacterized hydrolase SAUSA300_1291; EC=3.-.-.-;; TaxID=367830 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain USA300).;"
Uncharacterized hydrolase MW1286 n=86 Tax=Staphylococcus aureus RepID=Y1286_STAAW
hipO; hippurate hydrolase
L3_128_043G1_scaffold_116_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9704..10789
DNA (1086bp) protein (362aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
Alanine racemase n=6 Tax=Staphylococcus aureus RepID=C5N5F9_STAA3
alanine racemase family protein
L3_128_043G1_scaffold_116_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10779..12044
DNA (1266bp) protein (422aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
Diaminopimelate decarboxylase n=327 Tax=Staphylococcus aureus RepID=DCDA_STAAC
L3_128_043G1_scaffold_116_12
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12284..12685)
DNA (402bp) protein (134aa)
Protein msa n=311 Tax=Staphylococcus aureus RepID=MSA_STAA3
protein msa (Modulator of sarA)
Protein msa; Modulator of SarA; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
L3_128_043G1_scaffold_116_13
Staphylococcus simiae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12882..13082)
DNA (201bp) protein (67aa)
Cold shock protein CspA n=417 Tax=Staphylococcus RepID=CSPA_STAA3
cspA; cold shock protein
Stationary phase/starvation inducible regulatory protein CspD {ECO:0000313|EMBL:EHJ07348.1}; TaxID=911238 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simiae CCM 7213.;"
L3_128_043G1_scaffold_116_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13253..13561)
DNA (309bp) protein (103aa)
Uncharacterized protein-like protein n=405 Tax=Staphylococcus aureus RepID=A5IST5_STAA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92960.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_043G1_scaffold_116_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13724..13993
DNA (270bp) protein (90aa)
Acylphosphatase n=391 Tax=Staphylococcus aureus RepID=ACYP_STAA1
putative acylphosphatase
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_128_043G1_scaffold_116_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14012..14641
DNA (630bp) protein (210aa)
5-bromo-4-chloroindolyl phosphate hydrolysis protein-like protein n=51 Tax=Staphylococcus aureus RepID=A5IST7_STAA9
hypothetical protein
Xpac {ECO:0000313|EMBL:AFH69644.1}; TaxID=1155084 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus 71193.;"
L3_128_043G1_scaffold_116_17
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14673..15809
DNA (1137bp) protein (379aa)
TelA-like protein SAUSA300_1299 n=349 Tax=Staphylococcus aureus RepID=TELL_STAA3
Tellurite resistance protein
Tellurite resistance protein {ECO:0000313|EMBL:CRC12923.1}; Tellurite resistance protein TelA {ECO:0000313|EMBL:AIL57897.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_116_18
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15882..17225)
DNA (1344bp) protein (448aa)
Putative branched-chain amino acid carrier protein SAUSA300_1300 n=164 Tax=Staphylococcus aureus RepID=BRNQL_STAA3
Branched-chain amino acid transport system carrier protein
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIL57900.1}; Branched-chain amino acid transport system carrier protein {ECO:0000313|EMBL:CRC62309.1}; Putative branched-chain amino acid carrier protein SAOUHSC_01411 {ECO:0000313|EMBL:CEF82407.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_116_19
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17450..19336)
DNA (1887bp) protein (629aa)
Nitric oxide reductase activation protein NorD {ECO:0000313|EMBL:CKH12735.1}; EC=6.6.1.2 {ECO:0000313|EMBL:CKH12735.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
von Willebrand factor type A domain protein n=4 Tax=Staphylococcus aureus RepID=H0DCX3_STAAU
hypothetical protein
L3_128_043G1_scaffold_116_20
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19350..20141)
DNA (792bp) protein (264aa)
Uncharacterized protein SA1241 n=389 Tax=Staphylococcus aureus RepID=Y1241_STAAN
hypothetical protein
Uncharacterized protein SACOL1445; TaxID=93062 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain COL).;"
L3_128_043G1_scaffold_116_21
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20322..20525)
DNA (204bp) protein (68aa)
Uncharacterized protein n=15 Tax=Staphylococcus aureus RepID=I0C4C0_STAA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92938.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_043G1_scaffold_116_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20554..21417)
DNA (864bp) protein (288aa)
Glyoxalase family protein n=142 Tax=Staphylococcus aureus RepID=C5N5H1_STAA3
Putative Glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:EES92939.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_043G1_scaffold_116_23
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21943..23211)
DNA (1269bp) protein (423aa)
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2; Short=OGDC-E2;; Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (Succinyl-transferring) complex n=4 Tax=Staphylococcus aureus RepID=H0DBT4_STAAU
L3_128_043G1_scaffold_116_24
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23225..26023)
DNA (2799bp) protein (933aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component {ECO:0000255|HAMAP-Rule:MF_01169}; EC=1.2.4.2 {ECO:0000255|HAMAP-Rule:MF_01169};; Alpha-ketoglutarate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01169}; TaxID=426430 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Newman).;"
2-oxoglutarate dehydrogenase E1 component n=80 Tax=Staphylococcus aureus RepID=ODO1_STAA3
L3_128_043G1_scaffold_116_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26307..27662)
DNA (1356bp) protein (452aa)
Signal transduction histidine-protein kinase ArlS; EC=2.7.13.3;; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Signal transduction histidine-protein kinase ArlS n=321 Tax=Staphylococcus aureus RepID=ARLS_STAA3
arlS; signal transduction histidine kinase
L3_128_043G1_scaffold_116_26
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27659..28318)
DNA (660bp) protein (220aa)
Response regulator ArlR n=404 Tax=Staphylococcus aureus RepID=ARLR_STAA3
arlR; two-component response regulator
Putative response regulator ArlR {ECO:0000313|EMBL:CRC12630.1}; Response regulator ArlR {ECO:0000313|EMBL:AIL57908.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_043G1_scaffold_116_27
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28788..28988)
DNA (201bp) protein (67aa)
Uncharacterized protein n=88 Tax=Staphylococcus aureus RepID=I0JD17_STAAU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92945.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_043G1_scaffold_116_28
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29105..29719)
DNA (615bp) protein (205aa)
Conserved hypothetcial protein n=57 Tax=Staphylococcus aureus RepID=D2N744_STAA5
hypothetical protein
Strain SA-120 Contig629, whole genome shotgun sequence {ECO:0000313|EMBL:KIT95937.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_128_043G1_scaffold_116_29
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29736..30806)
DNA (1071bp) protein (357aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000255|HAMAP-Rule:MF_00033}; EC=2.4.1.227 {ECO:0000255|HAMAP-Rule:MF_00033};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000255|HAMAP-Rule:MF_00033}; TaxID=426430 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Newman).;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=66 Tax=Staphylococcus aureus RepID=MURG_STAA8
L3_128_043G1_scaffold_116_30
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30818..31327)
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=280 Tax=Staphylococcus aureus RepID=A5ISV0_STAA9
Acetyltransferase (GNAT) family
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AGY89532.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
Displaying 30 items

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