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L3_128_043G1_scaffold_168

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_168_1
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..189)
DNA (189bp) protein (63aa)
YraR n=3 Tax=Klebsiella RepID=R5WM59_9ENTR
NAD-binding domain 4 protein
YraR protein {ECO:0000313|EMBL:CEP32943.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
L3_128_043G1_scaffold_168_2
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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318..854
DNA (537bp) protein (179aa)
Intracellular protease, PfpI family n=8 Tax=Klebsiella RepID=B5XSZ0_KLEP3
general stress protein
Intracellular protease, PfpI family {ECO:0000313|EMBL:ADC56466.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
L3_128_043G1_scaffold_168_3
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(816..1259)
DNA (444bp) protein (148aa)
UPF0306 protein HMPREF0485_03301 n=3 Tax=Klebsiella RepID=D6GJL6_9ENTR
hypothetical protein
UPF0306 protein yhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
L3_128_043G1_scaffold_168_4
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1279..1599
DNA (321bp) protein (107aa)
UPF0213 protein L421_04490 n=3 Tax=Klebsiella pneumoniae RepID=V3F1P0_KLEPN
UPF0213 protein yhbQ {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
excinuclease ABC subunit C
L3_128_043G1_scaffold_168_5
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1586..2089)
DNA (504bp) protein (168aa)
Acetyltransferase n=3 Tax=Klebsiella pneumoniae RepID=V3DV05_KLEPN
Putative acyltransferase with acyl-CoA N-acyltransferase domain {ECO:0000313|EMBL:CEL88087.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
GNAT family acetyltransferase
L3_128_043G1_scaffold_168_6
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2083..2607)
DNA (525bp) protein (175aa)
SCP-2 sterol transfer family protein n=3 Tax=Klebsiella RepID=B5XSY6_KLEP3
SCP-2 sterol transfer family protein
Uncharacterized protein {ECO:0000313|EMBL:EWD78731.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
L3_128_043G1_scaffold_168_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2829..3824
DNA (996bp) protein (332aa)
Peptidase, U32 family n=11 Tax=Enterobacteriaceae RepID=B5XSY5_KLEP3
protease
Peptidase {ECO:0000313|EMBL:ESM61192.1}; TaxID=1328376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae MGH 44.;"
L3_128_043G1_scaffold_168_8
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3830..4708
DNA (879bp) protein (293aa)
Peptidase U32 n=6 Tax=Klebsiella RepID=D3RFG1_KLEVT
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:CDA03662.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
L3_128_043G1_scaffold_168_9
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4852..5859
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Klebsiella RepID=R5WK11_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA03663.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
L3_128_043G1_scaffold_168_10
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5904..7148)
DNA (1245bp) protein (415aa)
Tryptophan-specific transport protein n=3 Tax=Klebsiella RepID=B5XSY2_KLEP3
aromatic amino acid transporter
Tryptophan-specific transport protein {ECO:0000313|EMBL:ACI06662.1}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L3_128_043G1_scaffold_168_11
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7292..9223)
DNA (1932bp) protein (644aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
ATP-dependent RNA helicase DeaD n=6 Tax=Klebsiella RepID=B5XSY1_KLEP3
deaD; ATP-dependent RNA helicase DeaD
L3_128_043G1_scaffold_168_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9401..10285)
DNA (885bp) protein (295aa)
Lipoprotein NlpI n=144 Tax=Bacteria RepID=B5XSY0_KLEP3
nlpI; hypothetical protein
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; TaxID=1432553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS46.;"
L3_128_043G1_scaffold_168_13
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10394..12529)
DNA (2136bp) protein (712aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
Polyribonucleotide nucleotidyltransferase n=8 Tax=Klebsiella RepID=PNP_KLEP3
polynucleotide phosphorylase/polyadenylase
L3_128_043G1_scaffold_168_14
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12772..13041)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=7 Tax=Klebsiella RepID=RS15_KLEP3
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
L3_128_043G1_scaffold_168_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13190..14134)
DNA (945bp) protein (315aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
tRNA pseudouridine synthase B n=6 Tax=Klebsiella RepID=B5XSX6_KLEP3
truB; tRNA pseudouridine synthase B
L3_128_043G1_scaffold_168_16
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14134..14535)
DNA (402bp) protein (134aa)
Ribosome-binding factor A n=151 Tax=Bacteria RepID=RBFA_KLEP3
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1420013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae 30684/NJST258_2.;"
L3_128_043G1_scaffold_168_17
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14638..17328)
DNA (2691bp) protein (897aa)
Translation initiation factor IF-2 n=16 Tax=Klebsiella RepID=IF2_KLEP3
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola (strain At-22).;"
L3_128_043G1_scaffold_168_18
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17353..18840)
DNA (1488bp) protein (496aa)
Transcription termination factor NusA n=8 Tax=Klebsiella RepID=B5XSX3_KLEP3
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae (strain 342).;"
L3_128_043G1_scaffold_168_19
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18868..19320)
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=40 Tax=Klebsiella pneumoniae RepID=RIMP_KLEP3
ribosome maturation protein RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1328397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCICRE 14.;"
L3_128_043G1_scaffold_168_20
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19430..19636
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Salmonella choleraesuis (strain SC-B67) RepID=Q57JH6_SALCH
Uncharacterized protein {ECO:0000313|EMBL:CEL88072.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
hypothetical protein
L3_128_043G1_scaffold_168_21
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19913..21256
DNA (1344bp) protein (448aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
Argininosuccinate synthase n=1 Tax=Klebsiella pneumoniae MGH 20 RepID=V3QXS7_KLEPN
L3_128_043G1_scaffold_168_22
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21428..21880
DNA (453bp) protein (151aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Klebsiella pneumoniae UCICRE 10 RepID=V3DXE0_KLEPN
Crp/Fnr family transcriptional regulator
Genome assembly 8917 {ECO:0000313|EMBL:CEP32920.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
Displaying 22 items

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