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L3_128_043G1_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_199_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(634..1656)
DNA (1023bp) protein (341aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium breve RepID=D4BQ98_BIFBR
Transcriptional regulator, lacI type
Transcriptional regulator, lacI type {ECO:0000313|EMBL:AHJ21974.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_043G1_scaffold_199_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1991..2395
DNA (405bp) protein (135aa)
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z6_BIFBR
Solute-binding protein of ABC transporter system for sugars
Solute-binding protein of ABC transporter system for sugars {ECO:0000313|EMBL:AHJ21973.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_043G1_scaffold_199_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2350..3138
DNA (789bp) protein (263aa)
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z6_BIFBR
Solute-binding protein of ABC transporter system for sugars
Solute-binding protein of ABC transporter system for sugars {ECO:0000313|EMBL:AHJ21973.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_043G1_scaffold_199_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3261..3992
DNA (732bp) protein (244aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQA0_BIFBR
ABC transporter, permease protein {ECO:0000313|EMBL:EFE88395.1}; Sugar ABC transporter permease component {ECO:0000313|EMBL:BAR00819.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Transporter
L3_128_043G1_scaffold_199_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3953..4408
DNA (456bp) protein (152aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQA0_BIFBR
Transporter
ABC transporter, permease protein {ECO:0000313|EMBL:EFE88395.1}; Sugar ABC transporter permease component {ECO:0000313|EMBL:BAR00819.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_128_043G1_scaffold_199_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4410..5093
DNA (684bp) protein (228aa)
Sugar ABC transporter, permease protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0Z4_BIFBR
Glucose transport system permease protein
Glucose transport system permease protein {ECO:0000313|EMBL:AHJ21971.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_043G1_scaffold_199_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5260..7284
DNA (2025bp) protein (675aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8E1_BIFBA
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:AEF27642.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Hypothetical protein (possible glycogen debranching enzyme)
L3_128_043G1_scaffold_199_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7949..8623)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNN2_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KFI67757.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_043G1_scaffold_199_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8760..9959)
DNA (1200bp) protein (400aa)
Putative MutT1 protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3K9_BIFLN
Putative MutT1 protein {ECO:0000313|EMBL:CCK35780.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
mutT1; MutT1 protein
L3_128_043G1_scaffold_199_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10116..12353)
DNA (2238bp) protein (746aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNN0_BIFLS
L3_128_043G1_scaffold_199_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12857..13414
DNA (558bp) protein (186aa)
Metallophosphoesterase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNM9_BIFLS
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:KFI67760.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
metallophosphoesterase
L3_128_043G1_scaffold_199_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13359..14036
DNA (678bp) protein (226aa)
Ser/Thr phosphatase family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQA9_BIFBR
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:KFI67760.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphoesterase
L3_128_043G1_scaffold_199_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14227..15027)
DNA (801bp) protein (267aa)
IclR-type transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DPI1_BIFLD
transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:KEY32235.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_128_043G1_scaffold_199_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15321..16724
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
3-isopropylmalate dehydratase large subunit n=14 Tax=Bifidobacterium RepID=LEUC_BIFLD
isopropylmalate isomerase large subunit
L3_128_043G1_scaffold_199_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16808..17500
DNA (693bp) protein (231aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CBK70173.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
3-isopropylmalate dehydratase small subunit n=16 Tax=Bifidobacterium RepID=LEUD_BIFLD
isopropylmalate isomerase small subunit
L3_128_043G1_scaffold_199_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17667..17819)
DNA (153bp) protein (51aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3AXJ7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ29310.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_128_043G1_scaffold_199_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18056..18571
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI67765.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_043G1_scaffold_199_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18571..19503
DNA (933bp) protein (311aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4W0_BIFLO
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBK70171.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_043G1_scaffold_199_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19543..20670
DNA (1128bp) protein (376aa)
Dihydroorotate oxidase {ECO:0000313|EMBL:EEI80415.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EEI80415.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Dihydroorotate oxidase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWM0_BIFLN
dihydroorotate dehydrogenase
L3_128_043G1_scaffold_199_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20876..22222)
DNA (1347bp) protein (449aa)
NADH oxidase {ECO:0000313|EMBL:EEQ56038.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EEQ56038.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Uncharacterized NAD(FAD)-dependent dehydrogenases n=15 Tax=Bifidobacterium RepID=D6DCE8_BIFLN
hcaD; hcad
L3_128_043G1_scaffold_199_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22470..23795
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
UDP-N-acetylglucosamine enolpyruvyl transferase n=14 Tax=Bifidobacterium RepID=B3DPI6_BIFLD
murA; mura
L3_128_043G1_scaffold_199_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23844..25097)
DNA (1254bp) protein (418aa)
Aminotransferase, class I and II n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWL3_BIFLJ
class I and II aminotransferase
Aminotransferase, class I and II {ECO:0000313|EMBL:ADH01269.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_043G1_scaffold_199_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25191..26123)
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZWL2_BIFLJ
LysR family transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EEI80419.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_128_043G1_scaffold_199_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26152..28074
DNA (1923bp) protein (641aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWM5_BIFLN
argS; arginyl-tRNA synthetase
L3_128_043G1_scaffold_199_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28071..29669
DNA (1599bp) protein (533aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Diaminopimelate decarboxylase n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GWM6_BIFLN
lysA; diaminopimelate decarboxylase
L3_128_043G1_scaffold_199_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29829..31145
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWK9_BIFLJ
homoserine dehydrogenase
L3_128_043G1_scaffold_199_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31323..32285
DNA (963bp) protein (321aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Homoserine kinase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B935_BIFLN
thrB; homoserine kinase
L3_128_043G1_scaffold_199_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32422..33876
DNA (1455bp) protein (485aa)
Putative septum formation protein Maf n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B977_BIFLN
Putative septum formation protein Maf {ECO:0000313|EMBL:EIJ28031.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
maf protein
L3_128_043G1_scaffold_199_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33684..34253)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI67782.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_043G1_scaffold_199_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34771..34881)
DNA (111bp) protein (37aa)
Toxin-antitoxin system, toxin component, GNAT family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0W4_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44914.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying items 1-30 of 51 in total

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