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L3_128_043G1_scaffold_234

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_234_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(103..1035)
DNA (933bp) protein (311aa)
Bacterial regulatory helix-turn-helix protein, LysR family protein n=67 Tax=Enterococcus faecalis RepID=I7AP87_ENTFL
bacterial regulatory helix-turn-helix protein, LysR family protein
LysR family transcriptional regulator {ECO:0000313|EMBL:EOI92010.1}; TaxID=1158658 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0298.;"
L3_128_043G1_scaffold_234_2
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1051..1749)
DNA (699bp) protein (233aa)
Carbonic anhydrase n=211 Tax=Enterococcus RepID=D4MBN5_9ENTE
cah; Carbonic anhydrase, putative
Putative uncharacterized protein {ECO:0000313|EMBL:EEU94256.1}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
L3_128_043G1_scaffold_234_3
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1947..2579)
DNA (633bp) protein (211aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=565651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ARO1/DG.;"
Orotate phosphoribosyltransferase n=35 Tax=Enterococcus faecalis RepID=C2DCD3_ENTFL
L3_128_043G1_scaffold_234_4
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2581..3294)
DNA (714bp) protein (238aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1158673 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0293.;"
pyrF; orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=13 Tax=Enterococcus faecalis RepID=C7WAP6_ENTFL
L3_128_043G1_scaffold_234_5
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3284..4219)
DNA (936bp) protein (312aa)
dihydroorotate dehydrogenase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=565648 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis JH1.;"
Dihydroorotate dehydrogenase n=18 Tax=Enterococcus faecalis RepID=I7BYF4_ENTFL
L3_128_043G1_scaffold_234_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4219..5010)
DNA (792bp) protein (264aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=185 Tax=Enterococcus RepID=PYRK_ENTFA
dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1391468 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4539.;"
L3_128_043G1_scaffold_234_7
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5118..8300)
DNA (3183bp) protein (1061aa)
carbamoyl-phosphate synthase pyrimidine-specific large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=565648 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis JH1.;"
Carbamoyl-phosphate synthase large chain n=20 Tax=Enterococcus faecalis RepID=I7BUA8_ENTFL
L3_128_043G1_scaffold_234_8
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(8300..9403)
DNA (1104bp) protein (368aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1169288 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0348.;"
Carbamoyl-phosphate synthase small chain n=147 Tax=Enterococcus faecalis RepID=S0P902_ENTFA
L3_128_043G1_scaffold_234_9
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9382..10665)
DNA (1284bp) protein (428aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=749514 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX1341.;"
Dihydroorotase n=180 Tax=Enterococcus RepID=PYRC_ENTFA
L3_128_043G1_scaffold_234_10
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10674..11600)
DNA (927bp) protein (309aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=749495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX4248.;"
Aspartate carbamoyltransferase n=289 Tax=Enterococcus RepID=PYRB_ENTFA
L3_128_043G1_scaffold_234_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(11614..12894)
DNA (1281bp) protein (427aa)
Uracil permease n=240 Tax=Enterococcus RepID=F0PG56_ENTF6
uracil permease
Uracil permease {ECO:0000313|EMBL:EJV02503.1}; TaxID=1134790 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ERV37.;"
L3_128_043G1_scaffold_234_12
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(12911..13447)
DNA (537bp) protein (179aa)
Bifunctional protein pyrR n=283 Tax=Enterococcus RepID=PYRR_ENTFA
pyrR; Bifunctional protein pyrR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=565650 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis D6.;"
L3_128_043G1_scaffold_234_13
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13789..14694)
DNA (906bp) protein (302aa)
RluA family pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=565649 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis Fly1.;"
Pseudouridine synthase n=194 Tax=Enterococcus RepID=F2MMP7_ENTFO
L3_128_043G1_scaffold_234_14
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14681..15166)
DNA (486bp) protein (162aa)
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1391474 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0404.;"
Lipoprotein signal peptidase n=30 Tax=Enterococcus faecalis RepID=F2MMP8_ENTFO
L3_128_043G1_scaffold_234_15
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(15163..15498)
DNA (336bp) protein (112aa)
CBS domain n=64 Tax=Enterococcus RepID=D4MBP7_9ENTE
hypothetical protein
CBS domain-containing protein {ECO:0000313|EMBL:ETU20332.1}; TaxID=1391480 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0410.;"
Displaying 15 items

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