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L3_128_043G1_scaffold_290

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_043G1_scaffold_290_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

613..1536
DNA (924bp) protein (308aa)
Periplasmic solute-binding family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATD2_BIFLN
Periplasmic solute-binding family protein {ECO:0000313|EMBL:EIJ22375.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Solute binding protein of ABC transporter system
L3_128_043G1_scaffold_290_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1796..3871
DNA (2076bp) protein (692aa)
Arylsulfatase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATE8_BIFLN
Arylsulfatase {ECO:0000313|EMBL:KFI71867.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
sulfatase
L3_128_043G1_scaffold_290_3
unknown

Not on your lists

4306..4806
DNA (501bp) protein (167aa)

This feature has no annotations

L3_128_043G1_scaffold_290_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4806..6278
DNA (1473bp) protein (491aa)
Aldehyde dehydrogenase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATK1_BIFLN
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
aldehyde dehydrogenase
L3_128_043G1_scaffold_290_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6653..7921)
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Phosphoribosylamine--glycine ligase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATK4_BIFLN
phosphoribosylamine--glycine ligase
L3_128_043G1_scaffold_290_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7978..9015)
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT37_BIFLJ
phosphoribosylaminoimidazole synthetase
L3_128_043G1_scaffold_290_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9187..10698)
DNA (1512bp) protein (504aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Amidophosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT38_BIFLJ
L3_128_043G1_scaffold_290_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11019..11804)
DNA (786bp) protein (262aa)
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI71862.1}; EC=3.6.3.31 {ECO:0000313|EMBL:KFI71862.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATQ6_BIFLN
amino acid ABC transporter ATP-binding protein
L3_128_043G1_scaffold_290_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11801..12688)
DNA (888bp) protein (296aa)
Amino acid ABC transporter permease component n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MM29_BIFLS
Amino acid ABC transporter permease {ECO:0000313|EMBL:KFI71861.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
polar amino acid ABC transporter inner membrane subunit
L3_128_043G1_scaffold_290_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12798..13661)
DNA (864bp) protein (288aa)
Amino acid ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU77_BIFLS
extracellular solute-binding protein, family 3
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY29441.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_128_043G1_scaffold_290_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13867..14337)
DNA (471bp) protein (157aa)
Cupin domain protein, PF06172 family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATQ9_BIFLN
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIJ32220.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_128_043G1_scaffold_290_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14412..15785)
DNA (1374bp) protein (458aa)
Amidohydrolase family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATR9_BIFLN
Amidohydrolase family protein {ECO:0000313|EMBL:EIJ32266.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
amidohydrolase
L3_128_043G1_scaffold_290_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15825..17327)
DNA (1503bp) protein (501aa)
S-adenosyl-L-homocysteine hydrolase {ECO:0000313|EMBL:KFI71857.1}; EC=3.3.1.1 {ECO:0000313|EMBL:KFI71857.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
S-adenosyl-L-homocysteine hydrolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATS3_BIFLN
S-adenosyl-L-homocysteine hydrolase
L3_128_043G1_scaffold_290_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17492..19081
DNA (1590bp) protein (530aa)
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:KFI71856.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFI71856.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ImpB/MucB/SamB family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATP1_BIFLN
ImpB/MucB/SamB family protein involved in DNA repair
L3_128_043G1_scaffold_290_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19078..19296
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B3DT47_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI71855.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_043G1_scaffold_290_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19293..20033)
DNA (741bp) protein (247aa)
Aldo/keto family dehydrogenase {ECO:0000313|EMBL:KFI71854.1}; EC=1.1.1.317 {ECO:0000313|EMBL:KFI71854.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=13 Tax=Bifidobacterium RepID=D6D9H6_BIFLN
hypothetical protein
L3_128_043G1_scaffold_290_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20272..20541
DNA (270bp) protein (90aa)
Transcriptional regulator n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU71_BIFLS
Transcriptional regulator {ECO:0000313|EMBL:KFI71853.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
transcriptional regulator
L3_128_043G1_scaffold_290_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20538..21692
DNA (1155bp) protein (385aa)
HipA domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU70_BIFLS
Toxin HipA {ECO:0000313|EMBL:KEY29433.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_128_043G1_scaffold_290_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21723..22286)
DNA (564bp) protein (188aa)
Putative G/U mismatch-specific DNA glycosylase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L093_BIFBR
Uracil-DNA glycosylase {ECO:0000313|EMBL:KEY29432.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_128_043G1_scaffold_290_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22318..22836)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT50_BIFLJ
Putative membrane protein {ECO:0000313|EMBL:KFI71850.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_043G1_scaffold_290_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22815..24257)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT51_BIFLJ
Alcohol acetyltransferase family protein {ECO:0000313|EMBL:KFI71849.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_043G1_scaffold_290_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24230..25528)
DNA (1299bp) protein (433aa)
Esterase/lipase {ECO:0000313|EMBL:KFI71848.1}; EC=3.1.1.1 {ECO:0000313|EMBL:KFI71848.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Possible carboxylesterase or lipase n=2 Tax=Bifidobacterium longum RepID=Q8G5A7_BIFLO
esterase
L3_128_043G1_scaffold_290_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25666..29400)
DNA (3735bp) protein (1245aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU65_BIFLS
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KEY29428.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_128_043G1_scaffold_290_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29609..30361)
DNA (753bp) protein (251aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000255|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000255|HAMAP-Rule:MF_00137}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=PUR7_BIFLS
L3_128_043G1_scaffold_290_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30684..30992
DNA (309bp) protein (103aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU63_BIFLS
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KFI67721.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_043G1_scaffold_290_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30979..32409)
DNA (1431bp) protein (477aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphoribosylglycinamide formyltransferase 2 n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MM11_BIFLS
phosphoribosylglycinamide formyltransferase
L3_128_043G1_scaffold_290_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33148..34308
DNA (1161bp) protein (387aa)
Glycosyl transferase, group 1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU60_BIFLS
Group 1 glycosyl transferase {ECO:0000313|EMBL:KFI67719.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
group 1 glycosyl transferase
L3_128_043G1_scaffold_290_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34455..35480)
DNA (1026bp) protein (342aa)
Threonine aldolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU59_BIFLS
hypothetical protein
Amino acid lyase {ECO:0000313|EMBL:KEY29422.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_128_043G1_scaffold_290_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35794..36333
DNA (540bp) protein (180aa)
Bile acid transporter n=2 Tax=Bifidobacterium longum RepID=C2GUJ9_BIFLN
na+-dependent transporter/bile acid symporter
Sodium transporter {ECO:0000313|EMBL:KHD95997.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Displaying 29 items

View Taxonomy