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L3_128_054G1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_054G1_scaffold_18_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..244)
DNA (243bp) protein (81aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=282458 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MRSA252).;"
Holliday junction ATP-dependent DNA helicase RuvA n=117 Tax=Staphylococcus aureus RepID=RUVA_STAA3
Holliday junction ATP-dependent DNA helicase ruvA
L3_128_054G1_scaffold_18_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(258..713)
DNA (456bp) protein (152aa)
UPF0735 ACT domain-containing protein SA1469 n=402 Tax=Staphylococcus aureus RepID=Y1469_STAAN
hypothetical protein
UPF0735 ACT domain-containing protein SAHV_1630 {ECO:0000255|HAMAP-Rule:MF_00707}; TaxID=418127 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Mu3 / ATCC 700698).;"
L3_128_054G1_scaffold_18_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(726..2018)
DNA (1293bp) protein (431aa)
GTPase Obg n=319 Tax=Staphylococcus aureus RepID=OBG_STAA1
obg; GTP-binding protein Obg
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=158879 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain N315).;"
L3_128_054G1_scaffold_18_4
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(2769..3053)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=417 Tax=Staphylococcus RepID=RL27_STAA1
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=426430 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Newman).;"
L3_128_054G1_scaffold_18_5
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3065..3385)
DNA (321bp) protein (107aa)
Uncharacterized protein n=410 Tax=Staphylococcus aureus RepID=A5ITH0_STAA9
hypothetical protein
Putative ribosome-associated protein {ECO:0000313|EMBL:AFH69885.1}; TaxID=1155084 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus 71193.;"
L3_128_054G1_scaffold_18_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(3391..3699)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=5 Tax=Staphylococcus aureus RepID=F3TBG5_STAAU
rplU; ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
L3_128_054G1_scaffold_18_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3935..4465)
DNA (531bp) protein (177aa)
Rod shape-determining protein MreD n=4 Tax=Staphylococcus aureus RepID=H0DAU9_STAAU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD30827.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_128_054G1_scaffold_18_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4465..5307)
DNA (843bp) protein (281aa)
Cell shape-determining protein MreC n=4 Tax=Staphylococcus aureus RepID=H0DAV0_STAAU
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_128_054G1_scaffold_18_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5507..5626)
DNA (120bp) protein (40aa)
Uncharacterized protein n=71 Tax=Staphylococcus aureus RepID=A5ITH4_STAA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92674.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_054G1_scaffold_18_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5700..6173)
DNA (474bp) protein (158aa)
Uncharacterized protein n=296 Tax=Staphylococcus aureus RepID=A5ITH5_STAA9
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CRE42889.1}; Uncharacterized protein {ECO:0000313|EMBL:CEK44695.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_054G1_scaffold_18_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6647..6931)
DNA (285bp) protein (95aa)
Uncharacterized protein n=4 Tax=Staphylococcus aureus RepID=H0DAV2_STAAU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92677.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_054G1_scaffold_18_12
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6999..7670)
DNA (672bp) protein (224aa)
UPF0758 protein NWMN_1555 n=128 Tax=Staphylococcus aureus RepID=Y1555_STAAE
radC; DNA repair protein RadC
UPF0758 protein MW1604; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
L3_128_054G1_scaffold_18_13
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7682..8389)
DNA (708bp) protein (236aa)
Peptidase A24A domain protein n=310 Tax=Staphylococcus aureus RepID=A5ITI6_STAA9
type 4 prepilin-like peptidase
Late competence protein ComC%2C processing protease {ECO:0000313|EMBL:CRC06277.1}; Peptidase A24 {ECO:0000313|EMBL:AIL58192.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_054G1_scaffold_18_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8659..9930)
DNA (1272bp) protein (424aa)
folC; Dihydrofolate synthase / Folylpolyglutamate synthase (EC:6.3.2.12)
Folylpolyglutamate synthase/dihydrofolate synthase, putative {ECO:0000313|EMBL:ABD30835.1}; EC=6.3.2.17 {ECO:0000313|EMBL:ABD30835.1};; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
FolC bifunctional protein n=331 Tax=Staphylococcus aureus RepID=A5ITI7_STAA9
L3_128_054G1_scaffold_18_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(9943..12573)
DNA (2631bp) protein (877aa)
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};; TaxID=451516 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain USA300 / TCH1516).;"
valS; Valine--tRNA ligase (EC:6.1.1.9)
Valine--tRNA ligase n=3 Tax=Staphylococcus aureus RepID=H4A5J8_STAAU
L3_128_054G1_scaffold_18_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12937..13536
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EES92682.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EES92682.1};; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=18 Tax=Staphylococcus aureus RepID=C5N688_STAA3
L3_128_054G1_scaffold_18_17
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13759..14826)
DNA (1068bp) protein (356aa)
Abrb n=8 Tax=Staphylococcus aureus RepID=M7XV61_STAAU
hypothetical protein
Abrb {ECO:0000313|EMBL:CKH21793.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_128_054G1_scaffold_18_18
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15028..16314)
DNA (1287bp) protein (429aa)
Glutamate-1-semialdehyde 2,1-aminomutase 1 {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA 1 {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase 1 {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA-AT 1 {ECO:0000255|HAMAP-Rule:MF_00375};; TaxID=158878 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Mu50 / ATCC 700699).;"
Glutamate-1-semialdehyde 2,1-aminomutase 1 n=242 Tax=Staphylococcus aureus RepID=GSA1_STAA1
hemL; glutamate-1-semialdehyde-2,1-aminomutase
L3_128_054G1_scaffold_18_19
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16362..17336)
DNA (975bp) protein (325aa)
Porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase; Short=ALAD;; Short=ALADH;; EC=4.2.1.24;; Porphobilinogen synthase; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Delta-aminolevulinic acid dehydratase n=387 Tax=Staphylococcus aureus RepID=HEM2_STAA8
L3_128_054G1_scaffold_18_20
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17339..18007)
DNA (669bp) protein (223aa)
Uroporphyrinogen III synthase {ECO:0000313|EMBL:AAC45834.1}; EC=4.2.1.75 {ECO:0000313|EMBL:AAC45834.1};; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Uroporphyrinogen III synthase n=86 Tax=Staphylococcus aureus RepID=A6QHK3_STAAE
hemD; uroporphyrinogen III synthase HEM4
L3_128_054G1_scaffold_18_21
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18029..18955)
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000255|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000255|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000255|HAMAP-Rule:MF_00260}; Short=HMBS {ECO:0000255|HAMAP-Rule:MF_00260};; Pre-uroporphyrinogen synthase {ECO:0000255|HAMAP-Rule:MF_00260}; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Porphobilinogen deaminase n=24 Tax=Staphylococcus aureus RepID=HEM3_STAAS
hemC; porphobilinogen deaminase
L3_128_054G1_scaffold_18_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18997..19812)
DNA (816bp) protein (272aa)
membrane uroporphyrinogen III methylase (EC:2.1.1.107)
HemX family protein n=341 Tax=Staphylococcus aureus RepID=A5ITJ6_STAA9
Cytochrome c assembly protein {ECO:0000313|EMBL:EES92689.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_054G1_scaffold_18_23
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19834..21195)
DNA (1362bp) protein (454aa)
hemA; Glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Glutamyl-tRNA reductase n=1 Tax=Staphylococcus aureus subsp. aureus ATCC 51811 RepID=D6U9P0_STAAU
L3_128_054G1_scaffold_18_24
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21397..21987)
DNA (591bp) protein (197aa)
Probable GTP-binding protein EngB n=364 Tax=Staphylococcus aureus RepID=ENGB_STAA1
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000255|HAMAP-Rule:MF_00321}; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
L3_128_054G1_scaffold_18_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22141..23403)
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=82 Tax=Staphylococcus aureus RepID=CLPX_STAAR
ATP-dependent endopeptidase clp ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=282458 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MRSA252).;"
L3_128_054G1_scaffold_18_26
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23554..24855)
DNA (1302bp) protein (434aa)
tig; Trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; TaxID=451516 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain USA300 / TCH1516).;"
Trigger factor n=321 Tax=Staphylococcus aureus RepID=TIG_STAA1
L3_128_054G1_scaffold_18_27
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25018..25947)
DNA (930bp) protein (310aa)
Uncharacterized protein n=263 Tax=Staphylococcus aureus RepID=A5ITK1_STAA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92657.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_054G1_scaffold_18_28
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25966..26574)
DNA (609bp) protein (203aa)
MutT/NUDIX family protein n=4 Tax=Staphylococcus aureus RepID=H0DB28_STAAU
hypothetical protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EES92658.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_128_054G1_scaffold_18_29
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(26716..27072)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=419 Tax=Staphylococcus RepID=RL20_STAA1
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=93062 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain COL).;"
L3_128_054G1_scaffold_18_30
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(27119..27319)
DNA (201bp) protein (67aa)
50S ribosomal protein L35 n=418 Tax=Staphylococcus aureus RepID=RL35_STAA1
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=158878 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Mu50 / ATCC 700699).;"
Displaying items 1-30 of 134 in total

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