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L3_128_054G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_054G1_scaffold_39_1
unknown

Not on your lists

2..82
DNA (81bp) protein (27aa)

This feature has no annotations

L3_128_054G1_scaffold_39_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47..1711)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHM4_BIFBR
TraG/TraD family
Uncharacterized protein {ECO:0000313|EMBL:EPD75864.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_128_054G1_scaffold_39_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1708..2076)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXU8_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96208.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2084..2404)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXU9_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96209.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2394..3542)
DNA (1149bp) protein (383aa)
antirestriction protein n=1 Tax=Bifidobacterium breve RepID=UPI00030371E6
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96210.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3545..4549)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGI7_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75868.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_128_054G1_scaffold_39_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4577..5443)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXV4_BIFBU
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96214.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5512..6942)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1V3_BIFBR
Relaxase
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:AEF27673.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_128_054G1_scaffold_39_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6933..7337)
DNA (405bp) protein (135aa)
Bacterial mobilization protein MobC n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C6V0_BIFBA
mobilization protein
Bacterial mobilization protein MobC {ECO:0000313|EMBL:AEF26374.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_128_054G1_scaffold_39_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7631..7954
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3A109_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ80228.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8033..8359
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C6V2_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75873.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_128_054G1_scaffold_39_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8444..10021)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0003159CCD
Chromosome partitioning protein parB
Chromosome partitioning protein parB {ECO:0000313|EMBL:ABE96217.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10113..10721)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXW0_BIFBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96218.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_128_054G1_scaffold_39_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11285..11950)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHH6_BIFBR
Nucleotidyltransferase domain-containing protein {ECO:0000313|EMBL:KFI63076.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
putative nucleotidyltransferase domain protein
L3_128_054G1_scaffold_39_15
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12075..13439)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A113_BIFBR
integrase
Integrase {ECO:0000313|EMBL:AIZ14613.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_128_054G1_scaffold_39_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13861..14184
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GP29_BIFLS
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AHJ21677.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_128_054G1_scaffold_39_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14527..15114
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BM56_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89876.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_128_054G1_scaffold_39_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15758..16216)
DNA (459bp) protein (153aa)
Organic hydroperoxide resistance protein n=1 Tax=Bifidobacterium minimum RepID=UPI0003B68F87
OsmC-like protein {ECO:0000313|EMBL:KFI73695.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
organic hydroperoxide resistance protein
L3_128_054G1_scaffold_39_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16420..17217
DNA (798bp) protein (266aa)
Branched-chain amino acid transport protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y2L4_BIFLN
Branched-chain amino acid transport protein {ECO:0000313|EMBL:ESV34129.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
azlC; azlc
L3_128_054G1_scaffold_39_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17365..17547
DNA (183bp) protein (61aa)
Predicted branched-chain amino acid permeases (Azaleucine resistance) n=18 Tax=Bifidobacterium RepID=D6DBY9_BIFLN
Branched-chain amino acid permease {ECO:0000313|EMBL:KFI73693.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
branched-chain amino acid transport protein
L3_128_054G1_scaffold_39_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17702..18220)
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=18 Tax=Bifidobacterium RepID=B3DQJ8_BIFLD
phosphatase
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AIW44205.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_054G1_scaffold_39_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18344..19006)
DNA (663bp) protein (221aa)
Dihydrofolate reductase {ECO:0000313|EMBL:KFI73691.1}; EC=1.5.1.3 {ECO:0000313|EMBL:KFI73691.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Dihydrofolate reductase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASM0_BIFLN
dihydrofolate reductase
L3_128_054G1_scaffold_39_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19109..19981)
DNA (873bp) protein (291aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Thymidylate synthase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVD6_BIFLN
thymidylate synthase
L3_128_054G1_scaffold_39_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20109..20522
DNA (414bp) protein (138aa)
OsmC family protein n=20 Tax=Bifidobacterium RepID=B7GUQ8_BIFLS
OsmC-like protein {ECO:0000313|EMBL:KFI73689.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_054G1_scaffold_39_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20593..21630)
DNA (1038bp) protein (346aa)
Universal stress protein n=17 Tax=Bifidobacterium RepID=B3DQJ4_BIFLD
Universal stress family protein {ECO:0000313|EMBL:KFI73688.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_128_054G1_scaffold_39_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21800..22534)
DNA (735bp) protein (245aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX51_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:KFI73687.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
NLP/P60 protein
L3_128_054G1_scaffold_39_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22689..23333)
DNA (645bp) protein (215aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX52_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:EFV37772.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
spr1; spr1
L3_128_054G1_scaffold_39_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23648..24604)
DNA (957bp) protein (319aa)
CHAP domain containing protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW42_BIFLJ
CHAP domain containing protein
CHAP domain containing protein {ECO:0000313|EMBL:ADH01098.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_128_054G1_scaffold_39_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24997..26139
DNA (1143bp) protein (381aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphoserine aminotransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW43_BIFLJ
putative phosphoserine aminotransferase
L3_128_054G1_scaffold_39_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26264..26524
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B7GUR4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37775.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Displaying items 1-30 of 80 in total

View Taxonomy